Gene Sama_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1865 
Symbol 
ID4604115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2274199 
End bp2274894 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content58% 
IMG OID639781241 
Producthypothetical protein 
Protein accessionYP_927740 
Protein GI119775000 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCA GTCCACAAGA GCTTTCCAAA CAACTTGGCC GCCAGGATAT CTGGCTTGGA 
CAACAAACCT GCCAGCAGCC CGGTTATGCA ACCGGTTTTG AGGCGCTGGA TGCCGCCTTG
CCCGACAACG GCTGGCCTCG CCATGGGGTG TGTGAACTGA GCTGCCCGGT ACCGGGTTCG
CAGTCAATGC TGCTGTTAAC GCCACTGCTC AGGTGTATAC AGGGCGAAAA CGACACCCCG
GTGATGTTGG TTGGTGCCCC TTGGCAACTG AATCCCCAGT ACTTATTGCA ACATGGACTG
CGGCCGGAAG GCTTTTGCCT GGTGGATGTC AACGCACGTA AAGACAAACT CTGGGCCATA
GAGCAGAGTC TGGCCAGTGG TGGCTGCCGT TTGTTGCTGG GCTGGCTTGA CCGTTTAAGC
CTGACTGAAG CCCGGCGTTT GCAGCTGGCG GCGGAAAAGG GCGGCTGTCT GGCCATTATT
CTGGTGACTG ATGCCATTGA GGGTAATCCT TTGCCGCTGC GTGTGGGGTT AACCCCTGGC
GGTAACTCCG ACAGGCTGGA ACTTGCCTTG CTGAAACGCC GTGGCGGCAA ACCGCAGGAC
AGTTTGCAGA TTGAGGGACT TTCCCCGCTG CTGGCACGCT ACTTACCGTC GCAGCCATCA
GTGCAGTTGG TGCAGGGCCC CTGGGGCGGT GTCTGA
 
Protein sequence
MKTSPQELSK QLGRQDIWLG QQTCQQPGYA TGFEALDAAL PDNGWPRHGV CELSCPVPGS 
QSMLLLTPLL RCIQGENDTP VMLVGAPWQL NPQYLLQHGL RPEGFCLVDV NARKDKLWAI
EQSLASGGCR LLLGWLDRLS LTEARRLQLA AEKGGCLAII LVTDAIEGNP LPLRVGLTPG
GNSDRLELAL LKRRGGKPQD SLQIEGLSPL LARYLPSQPS VQLVQGPWGG V