Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1865 |
Symbol | |
ID | 4604115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2274199 |
End bp | 2274894 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781241 |
Product | hypothetical protein |
Protein accession | YP_927740 |
Protein GI | 119775000 |
COG category | [S] Function unknown |
COG ID | [COG4544] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA GTCCACAAGA GCTTTCCAAA CAACTTGGCC GCCAGGATAT CTGGCTTGGA CAACAAACCT GCCAGCAGCC CGGTTATGCA ACCGGTTTTG AGGCGCTGGA TGCCGCCTTG CCCGACAACG GCTGGCCTCG CCATGGGGTG TGTGAACTGA GCTGCCCGGT ACCGGGTTCG CAGTCAATGC TGCTGTTAAC GCCACTGCTC AGGTGTATAC AGGGCGAAAA CGACACCCCG GTGATGTTGG TTGGTGCCCC TTGGCAACTG AATCCCCAGT ACTTATTGCA ACATGGACTG CGGCCGGAAG GCTTTTGCCT GGTGGATGTC AACGCACGTA AAGACAAACT CTGGGCCATA GAGCAGAGTC TGGCCAGTGG TGGCTGCCGT TTGTTGCTGG GCTGGCTTGA CCGTTTAAGC CTGACTGAAG CCCGGCGTTT GCAGCTGGCG GCGGAAAAGG GCGGCTGTCT GGCCATTATT CTGGTGACTG ATGCCATTGA GGGTAATCCT TTGCCGCTGC GTGTGGGGTT AACCCCTGGC GGTAACTCCG ACAGGCTGGA ACTTGCCTTG CTGAAACGCC GTGGCGGCAA ACCGCAGGAC AGTTTGCAGA TTGAGGGACT TTCCCCGCTG CTGGCACGCT ACTTACCGTC GCAGCCATCA GTGCAGTTGG TGCAGGGCCC CTGGGGCGGT GTCTGA
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Protein sequence | MKTSPQELSK QLGRQDIWLG QQTCQQPGYA TGFEALDAAL PDNGWPRHGV CELSCPVPGS QSMLLLTPLL RCIQGENDTP VMLVGAPWQL NPQYLLQHGL RPEGFCLVDV NARKDKLWAI EQSLASGGCR LLLGWLDRLS LTEARRLQLA AEKGGCLAII LVTDAIEGNP LPLRVGLTPG GNSDRLELAL LKRRGGKPQD SLQIEGLSPL LARYLPSQPS VQLVQGPWGG V
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