Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1864 |
Symbol | |
ID | 4604114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2271746 |
End bp | 2274037 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781240 |
Product | hypothetical protein |
Protein accession | YP_927739 |
Protein GI | 119774999 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTGGC TTGGTGTATG GCTGCCTAAT TGGGAGCTGG ATTACCTGCG CCATGTGCAG GGGCTGGCGC TATCCATGCC ACTTATTCTG TACGATGTGG CAAAGGCACG GGTGCTCAAA GCCTGTCCGC AGGCGGCCAG TGCCGGGGTC ATGGCCGGTC AGAGCATGGG CAGTGCGGCG CAGCTGTGCC CGGAGGTGCA ACCCTTCCCC TTTGATCTCT CGCTGCACCG ACAAGGCAGC GATTGGCTGT GCCGCCACGG CTACAGTTTC AGCGCCCGTC TGGTGCCGCC CCCTGAGCCC GATACACTTT TTGCCCGTTG CCACGATGTG CTTTTGCTTG AAACGGGCTC CATGGCGAAG CTTTTTGGTG GCGAAGCGGC GCTGGCAAAG GCATTGGCAG CTGCCCTTGA AGGGCTTAAC TGCAGCTTTG CCATGGCCTT TGCTGCCACG CCGTTGGCGG CAGGTGTGCT GGCCAAAGCC CAGCCCTGTC TGGTATCAAA GACGCTGCAG CCAATGTTTG CCAAGGCTGC AACATTGCAA TCGGCTCTCA AGGTTTCAGC TTCAAAATCA GCATCAAAAG CGATTGCTGA GCCCAAAAGT GCAGCTGAGG ATTTATCACG GCAATTATCG GCGCTGCCAA TCTCCACTCT GCCTGTGCCC GAGGCGCTGT TATCCCGTTT GGAGGGGATG GGACTTGAGC ATATAGGTGC GCTGCAGGCT TTACCCGCTG CCGAGCTTGG GATCCGTTTT GGTCCCGAAT TCGTGTTGCT ATTGGCGAGG CTTAACGGTA ATCAGCCCCA TCCTCAGAGT TTTTACTGCC CGCAGGAAGA GTATTGTCAG CGGATTGAGC TGATGTATGA GGCCGAAAGC CTCAATGCCC TGGTGTTTGT GCTTGGGCGT ATGTTTGCCG AGCTGGCGCT GTTTTTACGT CAGCGACAGT TGGCGGTTTC CATGCTGGAG CTGGTACTGC ATTACCGGGT ATCTGAGTGG ATGAACCATG GGGAAAAGGG GCAGAAAGGG AGCAAACGAT TTTCTGCAAA AGCTTCTTGT ACAAAGGCCT CTTTCTCAGC CGCTTCGCCA GCAGTCCGGG GCAGCGTAGC GGGCCGTTTG GGGGGCAGGA TTGATGGGCG CTCCAAAGTA GAAGGAGTGC AGGAGGAGAT AGTATCTGAG CAAACCACAG ATGTTGTGGA TGTAGTTCAT GAAGCGCGCT TGCCGCTGGC ATACCCCTTT GCTGAATACA CGACCGATGG CCTGTTGGCC CTGTGCCGTT TGCAGCTGGA GCGCTTTACG CTGGCGGCTC CGGTGGTGGC GCTAACACTG CACCGCTGCC ACTTTGTCCC TAGAAGCGCG CCACCGGCAG GCGCCATCGA CAATAGCCAT AGAGCAAGTC TCAGTTTGCT GGCCCGGCTT GAGGCCCGGC TGGGGGAAGA CAGGGTAAAG CGTCTCGGTG CCAGACAAGC GCTCTTGCCG GAGCACAGTT TTTGCCTGCA GCCGATGTCA GCACCTGTGG CGGTTACCTA TAGGGCTTTG CCTGTCTCAT CGTTATCTGT CTCATATTTG TCTGCCGAGT CTTCACGTCA GCAGCCAAAA CCGATCCCAC GTAAATCGGC TGCGCCGTTA TTGCTAACCA AGCCAGCACA GCAACGCGTT GCAGCTGCCG GTATCCCTCC GGCACCAGAT AAAAAAGCCG CCAACCCGGC CGCGGCTTCG AACGTCATCC GTACCGCCTT TAGCCTCCCG GCTGCTCATG TCGGTAACAC AGCGACCATG ACTGAAATGG ATGGGGCGAA TGATGATTCG ATGGCTGGAG CCATAGCGCC GCGATTCGCT TCAGACATAA CTGATAAGGA CTTAGCAGTT ACGGGCTTAG CCGCGACTAA CGAGCCCTTT ACCAACAAAG CTGCAACTGC CGGAATGGAA CTGTGCGAGA CAGTGGCAAA AGCCGCAGCA ACCAGTAAGC CTGTGGCCAC ACAGGATGCT GCCACAGAAG GACTGTCACT TGCCTGCCGC CCGCCCTGGC TTTTGGTGGC GCCAGAAGCG ATTGCAGAAA CTGATGTTGA GCTCTTGCGC GGCCCCGAGC GGCTGCGTGA GCCCTGGTGG CATGGCAGCC AAACCATGGC GGCTCAAAGC ACAACTGAGC TTGAGACAGG CCAGGTAAAC GAGAGTTTGC CAAGCGGGAA ACCCAGAGGC GCGGCGCGGG ACTATTACCT TGCCCGCCAC CATGAAGGTG GCCTGTGCTG GGTGTTTCGC CGTGAGGGCG AGCCCGGACT TTACTTGCAG GGCTGGTTTT GA
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Protein sequence | MRWLGVWLPN WELDYLRHVQ GLALSMPLIL YDVAKARVLK ACPQAASAGV MAGQSMGSAA QLCPEVQPFP FDLSLHRQGS DWLCRHGYSF SARLVPPPEP DTLFARCHDV LLLETGSMAK LFGGEAALAK ALAAALEGLN CSFAMAFAAT PLAAGVLAKA QPCLVSKTLQ PMFAKAATLQ SALKVSASKS ASKAIAEPKS AAEDLSRQLS ALPISTLPVP EALLSRLEGM GLEHIGALQA LPAAELGIRF GPEFVLLLAR LNGNQPHPQS FYCPQEEYCQ RIELMYEAES LNALVFVLGR MFAELALFLR QRQLAVSMLE LVLHYRVSEW MNHGEKGQKG SKRFSAKASC TKASFSAASP AVRGSVAGRL GGRIDGRSKV EGVQEEIVSE QTTDVVDVVH EARLPLAYPF AEYTTDGLLA LCRLQLERFT LAAPVVALTL HRCHFVPRSA PPAGAIDNSH RASLSLLARL EARLGEDRVK RLGARQALLP EHSFCLQPMS APVAVTYRAL PVSSLSVSYL SAESSRQQPK PIPRKSAAPL LLTKPAQQRV AAAGIPPAPD KKAANPAAAS NVIRTAFSLP AAHVGNTATM TEMDGANDDS MAGAIAPRFA SDITDKDLAV TGLAATNEPF TNKAATAGME LCETVAKAAA TSKPVATQDA ATEGLSLACR PPWLLVAPEA IAETDVELLR GPERLREPWW HGSQTMAAQS TTELETGQVN ESLPSGKPRG AARDYYLARH HEGGLCWVFR REGEPGLYLQ GWF
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