Gene Sama_1864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1864 
Symbol 
ID4604114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2271746 
End bp2274037 
Gene Length2292 bp 
Protein Length763 aa 
Translation table11 
GC content58% 
IMG OID639781240 
Producthypothetical protein 
Protein accessionYP_927739 
Protein GI119774999 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGC TTGGTGTATG GCTGCCTAAT TGGGAGCTGG ATTACCTGCG CCATGTGCAG 
GGGCTGGCGC TATCCATGCC ACTTATTCTG TACGATGTGG CAAAGGCACG GGTGCTCAAA
GCCTGTCCGC AGGCGGCCAG TGCCGGGGTC ATGGCCGGTC AGAGCATGGG CAGTGCGGCG
CAGCTGTGCC CGGAGGTGCA ACCCTTCCCC TTTGATCTCT CGCTGCACCG ACAAGGCAGC
GATTGGCTGT GCCGCCACGG CTACAGTTTC AGCGCCCGTC TGGTGCCGCC CCCTGAGCCC
GATACACTTT TTGCCCGTTG CCACGATGTG CTTTTGCTTG AAACGGGCTC CATGGCGAAG
CTTTTTGGTG GCGAAGCGGC GCTGGCAAAG GCATTGGCAG CTGCCCTTGA AGGGCTTAAC
TGCAGCTTTG CCATGGCCTT TGCTGCCACG CCGTTGGCGG CAGGTGTGCT GGCCAAAGCC
CAGCCCTGTC TGGTATCAAA GACGCTGCAG CCAATGTTTG CCAAGGCTGC AACATTGCAA
TCGGCTCTCA AGGTTTCAGC TTCAAAATCA GCATCAAAAG CGATTGCTGA GCCCAAAAGT
GCAGCTGAGG ATTTATCACG GCAATTATCG GCGCTGCCAA TCTCCACTCT GCCTGTGCCC
GAGGCGCTGT TATCCCGTTT GGAGGGGATG GGACTTGAGC ATATAGGTGC GCTGCAGGCT
TTACCCGCTG CCGAGCTTGG GATCCGTTTT GGTCCCGAAT TCGTGTTGCT ATTGGCGAGG
CTTAACGGTA ATCAGCCCCA TCCTCAGAGT TTTTACTGCC CGCAGGAAGA GTATTGTCAG
CGGATTGAGC TGATGTATGA GGCCGAAAGC CTCAATGCCC TGGTGTTTGT GCTTGGGCGT
ATGTTTGCCG AGCTGGCGCT GTTTTTACGT CAGCGACAGT TGGCGGTTTC CATGCTGGAG
CTGGTACTGC ATTACCGGGT ATCTGAGTGG ATGAACCATG GGGAAAAGGG GCAGAAAGGG
AGCAAACGAT TTTCTGCAAA AGCTTCTTGT ACAAAGGCCT CTTTCTCAGC CGCTTCGCCA
GCAGTCCGGG GCAGCGTAGC GGGCCGTTTG GGGGGCAGGA TTGATGGGCG CTCCAAAGTA
GAAGGAGTGC AGGAGGAGAT AGTATCTGAG CAAACCACAG ATGTTGTGGA TGTAGTTCAT
GAAGCGCGCT TGCCGCTGGC ATACCCCTTT GCTGAATACA CGACCGATGG CCTGTTGGCC
CTGTGCCGTT TGCAGCTGGA GCGCTTTACG CTGGCGGCTC CGGTGGTGGC GCTAACACTG
CACCGCTGCC ACTTTGTCCC TAGAAGCGCG CCACCGGCAG GCGCCATCGA CAATAGCCAT
AGAGCAAGTC TCAGTTTGCT GGCCCGGCTT GAGGCCCGGC TGGGGGAAGA CAGGGTAAAG
CGTCTCGGTG CCAGACAAGC GCTCTTGCCG GAGCACAGTT TTTGCCTGCA GCCGATGTCA
GCACCTGTGG CGGTTACCTA TAGGGCTTTG CCTGTCTCAT CGTTATCTGT CTCATATTTG
TCTGCCGAGT CTTCACGTCA GCAGCCAAAA CCGATCCCAC GTAAATCGGC TGCGCCGTTA
TTGCTAACCA AGCCAGCACA GCAACGCGTT GCAGCTGCCG GTATCCCTCC GGCACCAGAT
AAAAAAGCCG CCAACCCGGC CGCGGCTTCG AACGTCATCC GTACCGCCTT TAGCCTCCCG
GCTGCTCATG TCGGTAACAC AGCGACCATG ACTGAAATGG ATGGGGCGAA TGATGATTCG
ATGGCTGGAG CCATAGCGCC GCGATTCGCT TCAGACATAA CTGATAAGGA CTTAGCAGTT
ACGGGCTTAG CCGCGACTAA CGAGCCCTTT ACCAACAAAG CTGCAACTGC CGGAATGGAA
CTGTGCGAGA CAGTGGCAAA AGCCGCAGCA ACCAGTAAGC CTGTGGCCAC ACAGGATGCT
GCCACAGAAG GACTGTCACT TGCCTGCCGC CCGCCCTGGC TTTTGGTGGC GCCAGAAGCG
ATTGCAGAAA CTGATGTTGA GCTCTTGCGC GGCCCCGAGC GGCTGCGTGA GCCCTGGTGG
CATGGCAGCC AAACCATGGC GGCTCAAAGC ACAACTGAGC TTGAGACAGG CCAGGTAAAC
GAGAGTTTGC CAAGCGGGAA ACCCAGAGGC GCGGCGCGGG ACTATTACCT TGCCCGCCAC
CATGAAGGTG GCCTGTGCTG GGTGTTTCGC CGTGAGGGCG AGCCCGGACT TTACTTGCAG
GGCTGGTTTT GA
 
Protein sequence
MRWLGVWLPN WELDYLRHVQ GLALSMPLIL YDVAKARVLK ACPQAASAGV MAGQSMGSAA 
QLCPEVQPFP FDLSLHRQGS DWLCRHGYSF SARLVPPPEP DTLFARCHDV LLLETGSMAK
LFGGEAALAK ALAAALEGLN CSFAMAFAAT PLAAGVLAKA QPCLVSKTLQ PMFAKAATLQ
SALKVSASKS ASKAIAEPKS AAEDLSRQLS ALPISTLPVP EALLSRLEGM GLEHIGALQA
LPAAELGIRF GPEFVLLLAR LNGNQPHPQS FYCPQEEYCQ RIELMYEAES LNALVFVLGR
MFAELALFLR QRQLAVSMLE LVLHYRVSEW MNHGEKGQKG SKRFSAKASC TKASFSAASP
AVRGSVAGRL GGRIDGRSKV EGVQEEIVSE QTTDVVDVVH EARLPLAYPF AEYTTDGLLA
LCRLQLERFT LAAPVVALTL HRCHFVPRSA PPAGAIDNSH RASLSLLARL EARLGEDRVK
RLGARQALLP EHSFCLQPMS APVAVTYRAL PVSSLSVSYL SAESSRQQPK PIPRKSAAPL
LLTKPAQQRV AAAGIPPAPD KKAANPAAAS NVIRTAFSLP AAHVGNTATM TEMDGANDDS
MAGAIAPRFA SDITDKDLAV TGLAATNEPF TNKAATAGME LCETVAKAAA TSKPVATQDA
ATEGLSLACR PPWLLVAPEA IAETDVELLR GPERLREPWW HGSQTMAAQS TTELETGQVN
ESLPSGKPRG AARDYYLARH HEGGLCWVFR REGEPGLYLQ GWF