| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1858 |
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| Symbol | |
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| ID | 4604108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2261431 |
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| End bp | 2262183 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781234 |
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| Product | thiF protein, putative |
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| Protein accession | YP_927733 |
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| Protein GI | 119774993 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGCTG ATAAAGATTT TATCCGCTAC TCGCGGCAAA TTTTGCTGCC AGAATGCGGC
GAAGCCGGGC AGCTCAGATT AAGGAACTCC CATGTGGCCA TAGTGGGCGT GGGTGGCCTT
GGCTGTCAGG CGGCCATGCT GCTGGCCGCG TCGGGAGTGG GGCACTTATC ACTGTTCGAT
GCCGATAGCG TGGAGCTTTC TAACCTGCCG CGCCAGATGC TGTTTTGCGA CCTTGATTTG
GGCAAAACCA AGGCCGGGGT CGCCGCCGCG CGCCTTCAGG CTCGAGAGCC TGGCTTAAAA
GTCTCTGTGT ACGGCGAGCT TAACAGTGAG ACGTTAACTC AGCTCGACGG CGCCGGGCTG
GTGCTTGATT GCACCGATAA TTTTACGGCG CGGCATCTTA TTTCGGCGTA CTGCGCTAAA
CACGGCAAAA CGCTTATCAG CGGTGCCATT GCCGGTTTTG ACGGGCTTTT GTTTGTTCAG
CGGCCCGGTG AGGGTGGCTG CTATCAGTGT CTGTTCCCGC CAGGCACCAC TTCGGCGCAA
AACTGTGCTG CGGTTGGGGT TATGGGGCCC GCTGTGGCCA TTGTCGCTTC GATGCAGGCA
CAACTTTGTT TGAATGAACT GCTTCAACTT CCCTGCGAGG CTGGACGCCT GCAACGTTTC
GATTTCAGGC ATTTTCGGTG GCATGAAGCC AGGGTGCCTG CCGATCCCCT TTGCCCGGTT
TGCGGTAAGG GCAAGGAGCG CAAGGCATGC TGA
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| Protein sequence | MLADKDFIRY SRQILLPECG EAGQLRLRNS HVAIVGVGGL GCQAAMLLAA SGVGHLSLFD
ADSVELSNLP RQMLFCDLDL GKTKAGVAAA RLQAREPGLK VSVYGELNSE TLTQLDGAGL
VLDCTDNFTA RHLISAYCAK HGKTLISGAI AGFDGLLFVQ RPGEGGCYQC LFPPGTTSAQ
NCAAVGVMGP AVAIVASMQA QLCLNELLQL PCEAGRLQRF DFRHFRWHEA RVPADPLCPV
CGKGKERKAC
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