Gene Sama_1856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1856 
SymbolthiG 
ID4604106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2260417 
End bp2261232 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID639781232 
Productthiazole synthase 
Protein accessionYP_927731 
Protein GI119774991 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2022] Uncharacterized enzyme of thiazole biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAA TTGCAGAAAC GGAATTTGGC TCCAGGCTGT TTACCGGCAC CGGCAAGTTT 
GCTTCGGGTA AGCTGATGCA GGAGGCTATT GCGGCCAGCG GCAGTGAGCT TGTCACCCTC
GCCATGAAGC GGGTGGATTT TAAAACCGGC AGCGATGATA TTCTGGCGCC GCTGCTGTCG
CGCGGCGTGC GTCTGTTGCC CAATACCTCC GGTGCCCGCA ATGCCAAAGA AGCGATATTC
GCAGCCGAGC TTGCCCGGGA AATGCTGGGC ACCGAGTGGC TGAAGCTTGA GATCCACCCG
GATCCCAAGT ACCTGATGCC GGATCCCATG GAAACCTTTG CCGCCGCCAA GGAGCTCGTC
AGTCAGGGCT TTAAGGTACT GCCATATGTG CATGCCGACC CTGTGCTCTG TCGTCGCCTC
GAAGAGATTG GCTGCGCAGC GGTGATGCCC CTTGGCAGCC CCATAGGCTC CAATCAGGGC
TTGGTGAGCC GTGAATTTTT GAAAATCATC ATTGAGCAGG CGAGCATTCC TGTGGTGGTG
GATGCGGGCA TTGGCGCGCC GTCCCATGCG TGTGAGGCGA TGGAGCTTGG CGCCGACGCC
GTGCTGGTTA ATACCGCTAT TGCTTCGAGT GCCGACCCTG TGCGTATGGC CAGAGCCTTT
GCGCTGGCGG TGCAAATTGG CCGTGAAGCC TATCTGGCCG GGCTTGGCAG TAAGAGCTTG
CACGCCCACG AAACCAGCCC GCTGACCGGC TTTTTAAATA CAGGCTTATC CACCACGGGC
TTGGTTGATT CGGGCATGGC GGAAAAGCTG TTATGA
 
Protein sequence
MLKIAETEFG SRLFTGTGKF ASGKLMQEAI AASGSELVTL AMKRVDFKTG SDDILAPLLS 
RGVRLLPNTS GARNAKEAIF AAELAREMLG TEWLKLEIHP DPKYLMPDPM ETFAAAKELV
SQGFKVLPYV HADPVLCRRL EEIGCAAVMP LGSPIGSNQG LVSREFLKII IEQASIPVVV
DAGIGAPSHA CEAMELGADA VLVNTAIASS ADPVRMARAF ALAVQIGREA YLAGLGSKSL
HAHETSPLTG FLNTGLSTTG LVDSGMAEKL L