Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1856 |
Symbol | thiG |
ID | 4604106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2260417 |
End bp | 2261232 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781232 |
Product | thiazole synthase |
Protein accession | YP_927731 |
Protein GI | 119774991 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2022] Uncharacterized enzyme of thiazole biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAAA TTGCAGAAAC GGAATTTGGC TCCAGGCTGT TTACCGGCAC CGGCAAGTTT GCTTCGGGTA AGCTGATGCA GGAGGCTATT GCGGCCAGCG GCAGTGAGCT TGTCACCCTC GCCATGAAGC GGGTGGATTT TAAAACCGGC AGCGATGATA TTCTGGCGCC GCTGCTGTCG CGCGGCGTGC GTCTGTTGCC CAATACCTCC GGTGCCCGCA ATGCCAAAGA AGCGATATTC GCAGCCGAGC TTGCCCGGGA AATGCTGGGC ACCGAGTGGC TGAAGCTTGA GATCCACCCG GATCCCAAGT ACCTGATGCC GGATCCCATG GAAACCTTTG CCGCCGCCAA GGAGCTCGTC AGTCAGGGCT TTAAGGTACT GCCATATGTG CATGCCGACC CTGTGCTCTG TCGTCGCCTC GAAGAGATTG GCTGCGCAGC GGTGATGCCC CTTGGCAGCC CCATAGGCTC CAATCAGGGC TTGGTGAGCC GTGAATTTTT GAAAATCATC ATTGAGCAGG CGAGCATTCC TGTGGTGGTG GATGCGGGCA TTGGCGCGCC GTCCCATGCG TGTGAGGCGA TGGAGCTTGG CGCCGACGCC GTGCTGGTTA ATACCGCTAT TGCTTCGAGT GCCGACCCTG TGCGTATGGC CAGAGCCTTT GCGCTGGCGG TGCAAATTGG CCGTGAAGCC TATCTGGCCG GGCTTGGCAG TAAGAGCTTG CACGCCCACG AAACCAGCCC GCTGACCGGC TTTTTAAATA CAGGCTTATC CACCACGGGC TTGGTTGATT CGGGCATGGC GGAAAAGCTG TTATGA
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Protein sequence | MLKIAETEFG SRLFTGTGKF ASGKLMQEAI AASGSELVTL AMKRVDFKTG SDDILAPLLS RGVRLLPNTS GARNAKEAIF AAELAREMLG TEWLKLEIHP DPKYLMPDPM ETFAAAKELV SQGFKVLPYV HADPVLCRRL EEIGCAAVMP LGSPIGSNQG LVSREFLKII IEQASIPVVV DAGIGAPSHA CEAMELGADA VLVNTAIASS ADPVRMARAF ALAVQIGREA YLAGLGSKSL HAHETSPLTG FLNTGLSTTG LVDSGMAEKL L
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