| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1852 |
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| Symbol | |
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| ID | 4604102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2256261 |
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| End bp | 2257166 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781228 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_927727 |
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| Protein GI | 119774987 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAG CAAAATCCAC CCTCGAGCAA TGGCGAATTC TGCAGGCTGT CGTAGACCAT
GGCGGCTATG CGCAGGCCGC CACTGCCCTA AACAAGAGCC AATCTTCCCT TAACCATGCC
GTTGCAAAGT TACAACATCA GCTGGGGGTG GAGCTTTTGG AGGTTAGGGG ACGCAAAGCC
TACCTGACTC CCCGCGGGGA AGTACTGCTC AGGCGCAGCC GCTACATCAC CCAGTCAGTC
ATGGAGCTTG AGCAACTTGC AGGCAATCTT GAACGCGGCT GGGAACCCAG CCTGACCATA
GCCCGGGAAA TTATCTATCC CATGGATAAG CTCATCACAG CCATCAACGC TTTTTTACCC
AATGGCAGAG GTACCCGGGT CTCTGTGATT GATTCGGTGC TCAATGGCAC CCATGAGTTG
GTGGAAGAAA ACAAGGTTGA TATTGCGCTC TGCGGCGGCA ATCCCCCAAA GGGACATTTG
GCACAGCCAC TGTGCGTCGT CGAATTGATT TTAGTGTGTC ACCCTTCCAA CCCACTTGCC
GCCGAGCTCA AGATCCAGGA CGACAAGTTT CTCGCCCAGC ATCTGCAAAT CGTTATTCGT
GATACCGCCG CCAAAACCAA TAAGGATATC GGCTGGCTTA AAGCTGAGCA GCGATGGACG
GTGAGTAATT TCCACGAAGC GAAAGCCATT CTGTGTTCGG GTAGCGGCTT TTGCTGGCTG
CCAAAAGAGT TGGTTGAAAA AGAGTTGGCG TCAGGAGACT TGGTCAGACT GTATCTGACC
GGAAGTGAAA GCCGGAAGAT CCCCATTAAT CTGGTTGTCC CTAGCAGAGA CGATCAGGGG
CCTGCGGGTG AGGCGTTGGA GCTGCTCATT CTTGCCCAGC ATGGTATCTC ATGCCAGCGC
CAGTAG
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| Protein sequence | MFRAKSTLEQ WRILQAVVDH GGYAQAATAL NKSQSSLNHA VAKLQHQLGV ELLEVRGRKA
YLTPRGEVLL RRSRYITQSV MELEQLAGNL ERGWEPSLTI AREIIYPMDK LITAINAFLP
NGRGTRVSVI DSVLNGTHEL VEENKVDIAL CGGNPPKGHL AQPLCVVELI LVCHPSNPLA
AELKIQDDKF LAQHLQIVIR DTAAKTNKDI GWLKAEQRWT VSNFHEAKAI LCSGSGFCWL
PKELVEKELA SGDLVRLYLT GSESRKIPIN LVVPSRDDQG PAGEALELLI LAQHGISCQR
Q
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