| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1849 |
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| Symbol | |
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| ID | 4604099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2252297 |
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| End bp | 2253253 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781225 |
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| Product | alpha-L-glutamate ligase-related protein |
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| Protein accession | YP_927724 |
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| Protein GI | 119774984 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR02291] alpha-L-glutamate ligase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTG CCTGGCCTTG GGAGCTTCGC CGCGCGGGTG TGCTCAATAT GAACAAGCGC
AATATCGACT TTATCGGTCG ATATAACCCG CGAAAATACT ATCAGCGGGT GGATGACAAA
CTGACCACCA AGCAGCTGGC CCTTGCCAAC GACATCGCAG TACCGGATTT GATTGGTGTG
GTGCAGGAGC AGCACGAGAT TGCCGAAATC CCGGAAATGG TACAGGGGCG CGGCGGCTTT
GTGATTAAGC CCGCCAAGGG CTCCGGGGGC AAAGGGATTT TGGTGATCAC CAAGGTCGAA
AACGGTCGCT ACTACAAACC CAGTGGCAAT GAAGTCACAC CCAGCGAAAT CGACCGCCAT
GTCTCCAATA TCTTAAGTGG CCTCTTCTCT CTTGGCGGCA AACCCGATGT CGCCATTGTA
GAAGGGCTTA TTCAGTTTGA TCCCGTATTC GATGGCTACA GCTATGAAGG GGTACCGGAT
ATCCGTTTGA TTGTGTTCAA GGGATATCCT GTAATGGGCA TGTTGCGCCT GTCTACCGCA
GCGTCCGATG GCAAGGCTAA CCTGCACCAG GGCGCGGTGG GGGTTGGCAT TGATATCGCC
ACAGGTAAAG GCCTCAGAGC AGTGCAGTTT AACGAGCCTA TCGAGTTTCA CCCCGACACA
GGCAAGCGCC TGATGGACAT TCAGGTGCCA AATTGGGATA CCCTGCTGAC CACCGCCTCC
AGTGCCTATG AAATGTGTGA GCTTGGTTAT CTTGGTACCG ATATGGTGCT GGACAGCGAA
AAAGGCCCTC TGCTGCTGGA GCTAAACGCC CGACCGGGTC TCGCCATACA AATCGCCAAC
GGCAAGGGAT TGCTGCCAAG ACTTAAACAC GTGGAATCGC TCGGCAACAA GTTTATGGAT
GTGAATGACA GGGTGGCCTA TGCCAAAGTG CATTTCGGCG CTCACGCTGA CCGCTAG
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| Protein sequence | MKFAWPWELR RAGVLNMNKR NIDFIGRYNP RKYYQRVDDK LTTKQLALAN DIAVPDLIGV
VQEQHEIAEI PEMVQGRGGF VIKPAKGSGG KGILVITKVE NGRYYKPSGN EVTPSEIDRH
VSNILSGLFS LGGKPDVAIV EGLIQFDPVF DGYSYEGVPD IRLIVFKGYP VMGMLRLSTA
ASDGKANLHQ GAVGVGIDIA TGKGLRAVQF NEPIEFHPDT GKRLMDIQVP NWDTLLTTAS
SAYEMCELGY LGTDMVLDSE KGPLLLELNA RPGLAIQIAN GKGLLPRLKH VESLGNKFMD
VNDRVAYAKV HFGAHADR
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