| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1848 |
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| Symbol | |
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| ID | 4604098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2250793 |
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| End bp | 2252295 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781224 |
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| Product | gonadoliberin III-related protein |
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| Protein accession | YP_927723 |
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| Protein GI | 119774983 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.860631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCAC GTAAGCCATT TTATATTTTC GTTTTTTTAT TGGTTGTCCT TGGGATCTCC
AGCAGTATTT ATCGCGGTGT AGAGCACAGG GTACCCTTCT TGCCGGGCGA GCAGGTCAAT
ACCTGGGCGA TAGATGCAAA GGTCAGCTTT ATCGGCCAGG GTGGCGAAAG TGAAGTGTCG
CTTGCCTTAC CCCAGGACCC CGCATTTGAA GTGCTGCTTG AGCACACAAC GTCTGCTGGT
TTTGGCCTGG CGATGATGGA CGATGCCGAC GGGCGACGTG CATTGTGGAG CAAACGTGCG
GTGCTTGGGC AACAGGATCT CTACTATAAG GTGACCTTGG TTCCCACAGG CATTTCTCGG
TTAGTTGAGG ATATCGAACC AAAAACGCCC GAAGCGCCTG TCTGGGCCGC CACCGAGCAG
ACCGCCGCTC AGGAAGTCAT CGATGCCGCC TGGGAACGCA GTGGCTCCAA CCTCTCCTAT
GCCCGCCAAC TGGTAACTCT GGTGGGGACC GAAAAGAGCC AGAATCTGGC GCTGCTGCTG
ACAGCCCAAA CGCCAAGCCG CCTCTTTATC AACTTGCTGG CCGCCAAGGG GGTTCCCGCC
CGTGAAGTCT CAGCCCTGTT TCTGGAAGAT CAGCGCCGGC GCCAGCAACT GGTGCCCTTT
GTGGAAGTGT ACGACCAGGG TGAATGGTAT CTCTTTGATG CCACAAGTGG CAAAGAAGGA
CGCCCAGAGA ATCTGCTGTT GTGGGAACGT CAGGGCAAGT CGGTACTGGA CGTGATAGGC
GGCAACAATT CTCAGGTAAG CTTTTCCATG CTGATGGAAA CCCGCCCCGC CCTTGCCACC
TCCATCGACA TGATGGAAAC CACTCAGGGA CTGGACTTTT CACTCTATCA ATTGCCACTG
GAAGAACAGA GCCTGTTCAA AGGGATTTTG CTTATCCCCA TCGGCGTGCT GATGGTGGTG
TTTTTGCGGG TGATAATCGG TATAAAAACC TCTGGCACCT TTATGCCGGT GTTGATTGCA
CTGGCCTTTA TCCAAACCAC CCTGCTCACA GGTTTGGTTG GCTTTTTACT GATTGTGGCC
TGTGGCCTGA TGATCCGCTC TTATCTGTCG CACCTTAACC TGCTGCTGAT TTCGCGAATA
TCGGCGGTCA TCATAGTGGT GATTGGCATC ATAGGTATCT TTACCCTGCT GTCTTACAAG
TTTGGCCTCA GCGAAGGCCT GACCATTACC TTCTTCCCGA TGATCATCCT CGCCTGGACC
ATTGAGCGAA TGTCTATCCT GTGGGAAGAA GAAGGCGCCA AAGAAGTCGT GCTTCAGGGT
GGCGGCAGCC TCTTGGTTGC GACTCTGGCC TACCTCGCCA TGAGCGCAAG CTGGGTCCAG
CACTGGGTGT TCAACTTCCT CGGGATCCAC CTGGTGATCC TGGCGTTGGT GATGTTGATG
GGCCAATACA CGGGCTATCG CCTGCTCGAG CTTAAGCGCT TTAAACCCCT GGCGGGAGAA
TAA
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| Protein sequence | MHSRKPFYIF VFLLVVLGIS SSIYRGVEHR VPFLPGEQVN TWAIDAKVSF IGQGGESEVS
LALPQDPAFE VLLEHTTSAG FGLAMMDDAD GRRALWSKRA VLGQQDLYYK VTLVPTGISR
LVEDIEPKTP EAPVWAATEQ TAAQEVIDAA WERSGSNLSY ARQLVTLVGT EKSQNLALLL
TAQTPSRLFI NLLAAKGVPA REVSALFLED QRRRQQLVPF VEVYDQGEWY LFDATSGKEG
RPENLLLWER QGKSVLDVIG GNNSQVSFSM LMETRPALAT SIDMMETTQG LDFSLYQLPL
EEQSLFKGIL LIPIGVLMVV FLRVIIGIKT SGTFMPVLIA LAFIQTTLLT GLVGFLLIVA
CGLMIRSYLS HLNLLLISRI SAVIIVVIGI IGIFTLLSYK FGLSEGLTIT FFPMIILAWT
IERMSILWEE EGAKEVVLQG GGSLLVATLA YLAMSASWVQ HWVFNFLGIH LVILALVMLM
GQYTGYRLLE LKRFKPLAGE
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