Gene Sama_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1847 
Symbol 
ID4604097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2250047 
End bp2250766 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content52% 
IMG OID639781223 
Producthypothetical protein 
Protein accessionYP_927722 
Protein GI119774982 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4067] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.359209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAC ATACCCTGGC CGTTGCCATC ATCGCCGTAT GTGCAGGTTG CAGCACTACC 
TCCAAACCCG AAGTTGCAGG CCCTGCCCCG CTAAATGCCC AAGAGCTGAA AGCCAACCTC
GATAACAGTG AAGCGCGCAT GATGGCCGTT ATCGATAAGG GAAATCTGGA TACACAAGCC
AAACTTTCTG AACTGAACAG CGCCATCGCA GCCCTGGATA AAAACCTCGC GACATTCAAG
CAAAATAATC AAATGACTGC GGCCGCAGTA GTACCTGTCG AATGTCCGCC CAGTGCCATC
GGCGACAAGT TCATGCTGGG GGAAGTCGAA AAAGTCTTCA TCGACGAACT TAAAGCCAGC
TTTCACACCC GCATCGACAC GGGGGCTGAA AGCTCGTCAC TGGATGCCCG CAACATCCTC
CTGTTTGAGC GAGACGGCGA ACAATGGGTG CGCTTCGATG TGATGGTACA GGGAGAATCC
AAACCGGCCT CCACCTATGA GTCAAAAGTG GTGCGTTTTG TGCGCATTAA ACAGGAAGGC
GATGTGGACG ACCGTCGTCC TGTTATTCAC GCCCACCTTA AAATCGGCAA ATACAGCGCC
GAAACCGATC TGAATCTAAC CGACCGCAGC CATCTGGATT ATCCCTTGTT GCTTGGCCGT
AAATTTATCA AAGACATTGC AGTTGTGGAT GTCAGCCAGC AGTTCATTCA CGGAAAGTAA
 
Protein sequence
MFKHTLAVAI IAVCAGCSTT SKPEVAGPAP LNAQELKANL DNSEARMMAV IDKGNLDTQA 
KLSELNSAIA ALDKNLATFK QNNQMTAAAV VPVECPPSAI GDKFMLGEVE KVFIDELKAS
FHTRIDTGAE SSSLDARNIL LFERDGEQWV RFDVMVQGES KPASTYESKV VRFVRIKQEG
DVDDRRPVIH AHLKIGKYSA ETDLNLTDRS HLDYPLLLGR KFIKDIAVVD VSQQFIHGK