Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1847 |
Symbol | |
ID | 4604097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2250047 |
End bp | 2250766 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781223 |
Product | hypothetical protein |
Protein accession | YP_927722 |
Protein GI | 119774982 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4067] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.359209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAC ATACCCTGGC CGTTGCCATC ATCGCCGTAT GTGCAGGTTG CAGCACTACC TCCAAACCCG AAGTTGCAGG CCCTGCCCCG CTAAATGCCC AAGAGCTGAA AGCCAACCTC GATAACAGTG AAGCGCGCAT GATGGCCGTT ATCGATAAGG GAAATCTGGA TACACAAGCC AAACTTTCTG AACTGAACAG CGCCATCGCA GCCCTGGATA AAAACCTCGC GACATTCAAG CAAAATAATC AAATGACTGC GGCCGCAGTA GTACCTGTCG AATGTCCGCC CAGTGCCATC GGCGACAAGT TCATGCTGGG GGAAGTCGAA AAAGTCTTCA TCGACGAACT TAAAGCCAGC TTTCACACCC GCATCGACAC GGGGGCTGAA AGCTCGTCAC TGGATGCCCG CAACATCCTC CTGTTTGAGC GAGACGGCGA ACAATGGGTG CGCTTCGATG TGATGGTACA GGGAGAATCC AAACCGGCCT CCACCTATGA GTCAAAAGTG GTGCGTTTTG TGCGCATTAA ACAGGAAGGC GATGTGGACG ACCGTCGTCC TGTTATTCAC GCCCACCTTA AAATCGGCAA ATACAGCGCC GAAACCGATC TGAATCTAAC CGACCGCAGC CATCTGGATT ATCCCTTGTT GCTTGGCCGT AAATTTATCA AAGACATTGC AGTTGTGGAT GTCAGCCAGC AGTTCATTCA CGGAAAGTAA
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Protein sequence | MFKHTLAVAI IAVCAGCSTT SKPEVAGPAP LNAQELKANL DNSEARMMAV IDKGNLDTQA KLSELNSAIA ALDKNLATFK QNNQMTAAAV VPVECPPSAI GDKFMLGEVE KVFIDELKAS FHTRIDTGAE SSSLDARNIL LFERDGEQWV RFDVMVQGES KPASTYESKV VRFVRIKQEG DVDDRRPVIH AHLKIGKYSA ETDLNLTDRS HLDYPLLLGR KFIKDIAVVD VSQQFIHGK
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