Gene Sama_1845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1845 
Symbol 
ID4604095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2248292 
End bp2249023 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content51% 
IMG OID639781221 
Productmethyltransferase, putative 
Protein accessionYP_927720 
Protein GI119774980 
COG category[R] General function prediction only 
COG ID[COG4106] Trans-aconitate methyltransferase 
TIGRFAM ID[TIGR00740] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.699945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.814005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC AACAGGACAC ACTGTTCGCC GAGCCAGGCG AGCATCAGGG TAACTTCCAG 
TTTGACAGTC GCGTTGCCGG TGTATTTGGC GACATGATCC GCCGCTCAGT GCCCGGTTAC
ACGCAAATCA TTAACACGAT TGGTGAAATT GCTGACCGCT GCGTCACGCC AGGCTCCAAT
GTTTATGATC TGGGCTGTTC TCTGGGAGCC GCGACTCTTG CCATCCGCCG CAAAATCGAA
GGTCGCAATG CGCGCATTTT TGCCATCGAT AACAGCGAGC CTATGTTGGT ACGGGCTGAA
GAAAACCTCT CCGCTTACGT GAGCGACACC AAAGTTTTCT TTCAGCTGGC TGATATTCGA
GATCAAACGT TTGAAAATGC CTCTCTGGTG GTGCTCAACT TTACCCTGCA GTTTTTGCCG
CCAGACGACA GAGACACCCT GCTGGCACGC ATCTATCAGG GACTTAACCC CGGCGGTATC
CTGCTGCTGT CTGAAAAACT CAAATTTGAC GGCGTCGATG TCCAGGCATT ACTGGACTCG
CTGCATCTCG ATTTCAAACG GGCAAATGGT TATAGCGAAC TGGAAATCAG TCAAAAACGC
AGCGCCATTG AGAATGTACT GATCCCCGAC ACGCTGGAAC AGCACAAAAC CCGACTGAAC
CAAGCCGGCT TCACCCAGGC TGACCTTTGG TTCCAATGTT TTAATTTTGC ATCTATGGTG
GCTATCAAGT GA
 
Protein sequence
MTNQQDTLFA EPGEHQGNFQ FDSRVAGVFG DMIRRSVPGY TQIINTIGEI ADRCVTPGSN 
VYDLGCSLGA ATLAIRRKIE GRNARIFAID NSEPMLVRAE ENLSAYVSDT KVFFQLADIR
DQTFENASLV VLNFTLQFLP PDDRDTLLAR IYQGLNPGGI LLLSEKLKFD GVDVQALLDS
LHLDFKRANG YSELEISQKR SAIENVLIPD TLEQHKTRLN QAGFTQADLW FQCFNFASMV
AIK