Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1839 |
Symbol | ruvB |
ID | 4604089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2240347 |
End bp | 2241351 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639781215 |
Product | Holliday junction DNA helicase RuvB |
Protein accession | YP_927714 |
Protein GI | 119774974 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.174268 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.184781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAG CCGACCGGCT TATTCAGCCC CAGGATCTGG GTCAGGAAGA TGTGATTGAC CGCGCCATGC GGCCAAAATT ACTCGACGAA TACACGGGGC AGGACGATAC CCGCGCCCAG CTTAAAGTCT TTATTGAGGC GGCTAAAAAG CGCGGCGAAG CCCTGGATCA TATGCTTATC TACGGCCCAC CAGGCCTGGG TAAAACCACC CTGGCCAATA TCGTTGCCAA CGAAATGGGG GTGAACATCA AGTCCACCTC CGGGCCTGTG CTGGAAAAGG CAGGCGATTT GGCGGCCCTG CTCACCAATC TTGAAGAAGG TGACGTGCTC TTTATCGATG AAATCCACCG CTTAAGCCCT GTGGTGGAGG AAATCCTCTA TCCGGCGATG GAAGACTATC AGCTGGATAT CATGATAGGT GAGGGGCCCG CTGCACGCTC TATCAAGCTG GATTTGCCGC CTTTTACCCT GGTGGGCGCA ACAACCCGAG CAGGTTCACT CACATCACCG CTGCGGGCCC GTTTCGGCAT TCCGCTGCGG CTTGAGTTTT ACAATGTCCG TGACCTGTCA TCCATTGTGG CGCGCTCCGC CAAGGTGATG GATGTGCCCA TGGATGAAGG TGGCGCCGAA GAGATTGCCC GCCGCAGCCG CGGTACTCCC CGTATCGCCA ACCGGCTGCT TCGCCGGGTG CGGGACTTTG CTGAAGTGAA GCATGATGGC GCAATCAGCC GTGCGGTGGC TCAGTCAGCA CTGGATTTAT TGGATGTGGA CAGCGAAGGC TTTGATTACA TGGACCGCAA GCTGCTGCTG GCGATTATCG ACAAGTTTAT GGGAGGACCT GTGGGTCTGG ATAACCTTGC CGCCGCCATC GGTGAGGAAC GTGAAACCAT AGAAGATGTG CTTGAGCCAT TTCTTATTCA GCAGGGGTTT GTGCAGCGCA CACCAAGGGG GCGGATTGCC ACGGCCCGTG CCTACAGCCA TTTTGACCTT ATCAAACCAG ATTGA
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Protein sequence | MIEADRLIQP QDLGQEDVID RAMRPKLLDE YTGQDDTRAQ LKVFIEAAKK RGEALDHMLI YGPPGLGKTT LANIVANEMG VNIKSTSGPV LEKAGDLAAL LTNLEEGDVL FIDEIHRLSP VVEEILYPAM EDYQLDIMIG EGPAARSIKL DLPPFTLVGA TTRAGSLTSP LRARFGIPLR LEFYNVRDLS SIVARSAKVM DVPMDEGGAE EIARRSRGTP RIANRLLRRV RDFAEVKHDG AISRAVAQSA LDLLDVDSEG FDYMDRKLLL AIIDKFMGGP VGLDNLAAAI GEERETIEDV LEPFLIQQGF VQRTPRGRIA TARAYSHFDL IKPD
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