| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1836 |
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| Symbol | |
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| ID | 4604086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2235897 |
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| End bp | 2236538 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781212 |
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| Product | endonuclease III |
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| Protein accession | YP_927711 |
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| Protein GI | 119774971 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0177] Predicted EndoIII-related endonuclease |
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| TIGRFAM ID | [TIGR01083] endonuclease III |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.194851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.186741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAACC AAAAGCGAGT GGAAATTTTA ACCCGGCTTA GAGCCAATAA CCCCAAGCCA
GAGACTGAGC TTAATTTTTC CTCCCCCTTT GAATTGCTTG TGGCTGTCAC CCTGTCGGCC
CAGGCCACCG ATGTCAGCGT GAATAAGGCC ACCGACAAGC TGTTTCCGGT GGCCAATACC
CCACAAGCCA TTGTTGACCT TGGTGTCGAG GGACTTAAGG AATACATCAA AACCATCGGG
CTTTTTAATA ACAAAGCCAT CAACGTGGTG AAGCTATCGC AAATTCTGCT GGATAAACAC
GGCGGCGAAG TGCCGGAAGA CAGAGAAGCG CTGGAAGCCC TGCCCGGCGT TGGCCGCAAG
ACCGCCAACG TGGTACTTAA CACCGCCTTC GGCTGGCCTA CCATTGCCGT GGACACCCAT
ATTTTCCGTA TGGCAAACCG CACCAGGTTT GCTCCCGGCA AGAACGTGGT CGAGGTAGAA
GAGCGGATGC TCAAGGTGGT GCCGGCGGAG TTTAAAGTGG ATGTGCACCA CTGGTTTATC
CTCCACGGCC GCTATACCTG CCTTGCCCGC AAACCGCGCT GTGGTTCCTG CATCATCGAA
GATTTATGCG AATTCAAGGA TAAGGTTTAC CCGGACGAGT AA
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| Protein sequence | MNNQKRVEIL TRLRANNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT
PQAIVDLGVE GLKEYIKTIG LFNNKAINVV KLSQILLDKH GGEVPEDREA LEALPGVGRK
TANVVLNTAF GWPTIAVDTH IFRMANRTRF APGKNVVEVE ERMLKVVPAE FKVDVHHWFI
LHGRYTCLAR KPRCGSCIIE DLCEFKDKVY PDE
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