| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1831 |
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| Symbol | |
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| ID | 4604081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2230263 |
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| End bp | 2230832 |
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| Gene Length | 570 bp |
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| Protein Length | 189 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781207 |
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| Product | electron transport complex protein RnfB |
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| Protein accession | YP_927706 |
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| Protein GI | 119774966 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
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| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.101638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0584321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCAG TCATGATAGC GGTTGTATTA CTGGGCCTGC TGGCATTGGT ATTTGGTGCC
ATATTGGGCT TTGCTGCCGT CAAATTCAGA GTAGAAGGCG ATCCGCTGGT GGACCAGGTC
GAGTCCCTCT TGCCGCAAAC TCAGTGCGGT CAGTGTGGCT ATCCCGGTTG CCGCCCTTAC
GCCGAAGCCA TCGCTGGCGG CGACCAAATC AACAAATGCC CCCCCGGTGG TACAGCCACC
ATGGAAAAGA TTGCTGAGCT AATGGGCGTT GAACCTCAGC CACTGTCTGC CACCACTGAG
CAGCAAGTCA AAAAAGTTGC CTACATTCGT GAAGACGAGT GTATCGGCTG TACCAAGTGT
ATTCAGGCGT GTCCCGTGGA TGCCATCGTC GGCGCCGGTA AGCTGATGCA CACCGTCATT
ACCCAGGACT GCACCGGCTG CGATCTCTGT GTCGAGCCCT GCCCTGTCGA TTGCATCGAC
ATGCTCCCTG TCACTCAGGA CATCAAGACC TGGAATTGGA AACTGAGTGC CATTCCCGTG
ATGCAGCTCG AAGAGGACAA ACAGTGCTGA
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| Protein sequence | MSAVMIAVVL LGLLALVFGA ILGFAAVKFR VEGDPLVDQV ESLLPQTQCG QCGYPGCRPY
AEAIAGGDQI NKCPPGGTAT MEKIAELMGV EPQPLSATTE QQVKKVAYIR EDECIGCTKC
IQACPVDAIV GAGKLMHTVI TQDCTGCDLC VEPCPVDCID MLPVTQDIKT WNWKLSAIPV
MQLEEDKQC
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