| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1830 |
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| Symbol | |
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| ID | 4604080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2229685 |
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| End bp | 2230263 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781206 |
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| Product | Na(+)-translocating NADH-quinone reductase subunit E |
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| Protein accession | YP_927705 |
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| Protein GI | 119774965 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0346506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.11799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAT ATCTCCTGTT GTTGATCGGT ACTGTGCTGG TCAACAACTT CGTTTTGGTA
AAATTTCTCG GACTTTGCCC CTTTATGGGG GTGTCAGGCA AGCTTGAGTC TGCCATCGGC
ATGTCGATGG CGACCACCTT TGTGTTGACC CTGGCCTCCG TTCTCAGTTT CCTGGTAAAC
CAGTACCTGC TGGCACCGTT TGATTTGACC TATCTGCGCA CCATGAGTTT TATTCTGGTG
ATCGCTGTTG TGGTGCAATT CACCGAAATG CTGGTACAAA AAACCAGTGC CAGTCTGCAC
CGTGCGCTGG GTATTTACCT GCCGCTTATC ACCACCAACT GCGCCGTTCT CGGTGTGGCG
CTGCTCAATG TGAACGAGCA GCACGATTTT CTGGAGTCAG CCATCTATGG CTTTGGCGCC
GCAGTGGGAT TCTCTTTGGT GCTCATTCTC TTCTCAGCCA TGCGTGAACG CCTTGCTGCA
GCTGATGTGC CCATGCCTTT TCGGGGTGGC GCCATTGCCA TGATCACCGC TGGCCTTATG
TCTCTGGCCT TTATGGGCTT TACCGGTTTG GTGAAATAA
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| Protein sequence | MSEYLLLLIG TVLVNNFVLV KFLGLCPFMG VSGKLESAIG MSMATTFVLT LASVLSFLVN
QYLLAPFDLT YLRTMSFILV IAVVVQFTEM LVQKTSASLH RALGIYLPLI TTNCAVLGVA
LLNVNEQHDF LESAIYGFGA AVGFSLVLIL FSAMRERLAA ADVPMPFRGG AIAMITAGLM
SLAFMGFTGL VK
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