Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1823 |
Symbol | |
ID | 4604073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2219742 |
End bp | 2220254 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781191 |
Product | hypothetical protein |
Protein accession | YP_927698 |
Protein GI | 119774958 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0926764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.581548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGATTG CTGCTGGTTT AGTCAATGAA AGTCAAGTAG GAGACCGCCT TGCCCGTGCT GTTGAAGAGG GGCGCAGGGG CGATTTTGGC TTGATATTGG CAATGTTGTC CCAGGATGCC CGTGATTTTG CAGAGTTTTG CTTATCCGGC GACGAATCGG TTGAGCAAAA GCTGCAAAAA CATTTTGAGC TGCCACCCCA ACAGCCTCTG GTCGCCAAAC CCGGGGCTGA AGACTGTATG GATAACAGTG GTGTCTTCAG AACCTTTGGT AAAAAGGCAT TTCATTTAAG TCAGGCACTC TTGCCCGAAC CTGTCGTCAT CCGCGGCGAC CTTCCTGCTG ATATGTTAAT TGCGTTGAAT AACTGCTCAC ACACTGTGCA GCGTCGCTAC TATTCTGACG CGCGGCCGGC CTTACCCACA CACCAACATT TTAACGACAT CCTTGAAGCG CAGCGTGCAC TCGGAAAACT GATGGAGCAC GCAGACAATC GAAACCTGAT GGCAATGGTT TGA
|
Protein sequence | MQIAAGLVNE SQVGDRLARA VEEGRRGDFG LILAMLSQDA RDFAEFCLSG DESVEQKLQK HFELPPQQPL VAKPGAEDCM DNSGVFRTFG KKAFHLSQAL LPEPVVIRGD LPADMLIALN NCSHTVQRRY YSDARPALPT HQHFNDILEA QRALGKLMEH ADNRNLMAMV
|
| |