Gene Sama_1823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1823 
Symbol 
ID4604073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2219742 
End bp2220254 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content51% 
IMG OID639781191 
Producthypothetical protein 
Protein accessionYP_927698 
Protein GI119774958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0926764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.581548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTG CTGCTGGTTT AGTCAATGAA AGTCAAGTAG GAGACCGCCT TGCCCGTGCT 
GTTGAAGAGG GGCGCAGGGG CGATTTTGGC TTGATATTGG CAATGTTGTC CCAGGATGCC
CGTGATTTTG CAGAGTTTTG CTTATCCGGC GACGAATCGG TTGAGCAAAA GCTGCAAAAA
CATTTTGAGC TGCCACCCCA ACAGCCTCTG GTCGCCAAAC CCGGGGCTGA AGACTGTATG
GATAACAGTG GTGTCTTCAG AACCTTTGGT AAAAAGGCAT TTCATTTAAG TCAGGCACTC
TTGCCCGAAC CTGTCGTCAT CCGCGGCGAC CTTCCTGCTG ATATGTTAAT TGCGTTGAAT
AACTGCTCAC ACACTGTGCA GCGTCGCTAC TATTCTGACG CGCGGCCGGC CTTACCCACA
CACCAACATT TTAACGACAT CCTTGAAGCG CAGCGTGCAC TCGGAAAACT GATGGAGCAC
GCAGACAATC GAAACCTGAT GGCAATGGTT TGA
 
Protein sequence
MQIAAGLVNE SQVGDRLARA VEEGRRGDFG LILAMLSQDA RDFAEFCLSG DESVEQKLQK 
HFELPPQQPL VAKPGAEDCM DNSGVFRTFG KKAFHLSQAL LPEPVVIRGD LPADMLIALN
NCSHTVQRRY YSDARPALPT HQHFNDILEA QRALGKLMEH ADNRNLMAMV