Gene Sama_1819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1819 
Symbol 
ID4604069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2215956 
End bp2216519 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content48% 
IMG OID639781187 
Producthypothetical protein 
Protein accessionYP_927694 
Protein GI119774954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.581548 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTT TTCCGATATT GTTGAGCCTG ATGCTCTCGT TTGCTGTTTT GGCAAACAAC 
GCCCCGCAAA CGAAAGATGA CATTGCCATC AATAAAACCT ATGACCTCTT TTCTGAGGCC
TTCGACAAGC TGAATGCTGC CCTGATAGGC GAGGCATACA CCGAGAGTGC CTGCTATATA
CCCGAGCGTC ACGATAAAGA AATTATTCGC GGACGCGATG CCATTGTGTC TGTTTATGAA
AAGTTTTTCG GCAAAATCCG CAGTAAAAAT GCCCGTATCG AAGTGGATTT CCGGGTGATA
GACCGCAGTC GCGCAGGCGA TTCAGTGACG GATGTTGGTT ATTACCTTAT TCGATTCCAT
CCGGCCAGCG ACACCGGTGA ACCCGTCAGT GAATACGCAG GCAAATTTGT CACTGTCTCC
AGAAAGCAAG CCGATGGCAA TTGGCTCCTG TCCATCGATT CCAGCAACCG CTCAGAGCCC
AGGTTTTATT ACCAGACACA GCCTGTGGGT GAACTCTATT TCGGACAAAG GTTCATCTCA
CCCGATGTTG CCAAAAAACC CTAA
 
Protein sequence
MRIFPILLSL MLSFAVLANN APQTKDDIAI NKTYDLFSEA FDKLNAALIG EAYTESACYI 
PERHDKEIIR GRDAIVSVYE KFFGKIRSKN ARIEVDFRVI DRSRAGDSVT DVGYYLIRFH
PASDTGEPVS EYAGKFVTVS RKQADGNWLL SIDSSNRSEP RFYYQTQPVG ELYFGQRFIS
PDVAKKP