Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1819 |
Symbol | |
ID | 4604069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2215956 |
End bp | 2216519 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639781187 |
Product | hypothetical protein |
Protein accession | YP_927694 |
Protein GI | 119774954 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.581548 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATTT TTCCGATATT GTTGAGCCTG ATGCTCTCGT TTGCTGTTTT GGCAAACAAC GCCCCGCAAA CGAAAGATGA CATTGCCATC AATAAAACCT ATGACCTCTT TTCTGAGGCC TTCGACAAGC TGAATGCTGC CCTGATAGGC GAGGCATACA CCGAGAGTGC CTGCTATATA CCCGAGCGTC ACGATAAAGA AATTATTCGC GGACGCGATG CCATTGTGTC TGTTTATGAA AAGTTTTTCG GCAAAATCCG CAGTAAAAAT GCCCGTATCG AAGTGGATTT CCGGGTGATA GACCGCAGTC GCGCAGGCGA TTCAGTGACG GATGTTGGTT ATTACCTTAT TCGATTCCAT CCGGCCAGCG ACACCGGTGA ACCCGTCAGT GAATACGCAG GCAAATTTGT CACTGTCTCC AGAAAGCAAG CCGATGGCAA TTGGCTCCTG TCCATCGATT CCAGCAACCG CTCAGAGCCC AGGTTTTATT ACCAGACACA GCCTGTGGGT GAACTCTATT TCGGACAAAG GTTCATCTCA CCCGATGTTG CCAAAAAACC CTAA
|
Protein sequence | MRIFPILLSL MLSFAVLANN APQTKDDIAI NKTYDLFSEA FDKLNAALIG EAYTESACYI PERHDKEIIR GRDAIVSVYE KFFGKIRSKN ARIEVDFRVI DRSRAGDSVT DVGYYLIRFH PASDTGEPVS EYAGKFVTVS RKQADGNWLL SIDSSNRSEP RFYYQTQPVG ELYFGQRFIS PDVAKKP
|
| |