| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1817 |
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| Symbol | |
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| ID | 4604067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2213192 |
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| End bp | 2215048 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781185 |
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| Product | peptidyl-dipeptidase A |
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| Protein accession | YP_927692 |
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| Protein GI | 119774952 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0907882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.451295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTACGCC CCGCCAAATT GGCCTTGGGT GTAGCCCTTG CACTCGGCCT CAGCGCCTGT
CAGGACGAGC AGCACTCAGT TGCTGTTAAT AAAGACGTTG CTGCAGTTAC TGCGGTGTCC
TCTAACGTAT CCACCCAGGA TGCGATTGAT TTTATCAATC AGGCGGAAGC CGAGCTTGCC
GCGCTGTCTC TAGAGGCTAA CCGTGCAGAG TGGATATACA GTAACTTTAT CACCGAAGAC
ACAGCATCCT TATCGGCCGC AGTTAACGAA AAGGTGACCG CCACGTCGGT ACGTTTAGCC
ACTGAAGCTG CCAAATTTGC GGAAGTTGAG CTTGATGCCG TGAACGCCCG TAAGCTCAAT
ATGCTCAGAA GCGCACTGGT TCTGCCCTCG CCACTCGATC CTGCAAAAAA TGCCGAGCTG
GCCGGTATCG TTGCCCAGCT CAACGGCCTC TATGGCAAAG GCAAATACTG CTTTGCCGAT
GGTCGCTGCC TGACCCAGCC AGAGCTCTCT GCCCTGATGG CCGAATCCCG TGACCCTGAA
CTCTTAAAAG AAATCTGGGC TGGCTGGCGT GACATTGCCA AACCCATGCG TCCGCTGTTC
GAACGCGAAG TGGTACTTGC CAATGAAGGA GCCAAAGACC TGGGCTTTGC CAATTTGTCT
GAGCTGTGGC GCAGTCAATA CGATATGGCG CCTGATGCAT TTTCCACCGA ACTTGACCGC
CTCTGGGGTC AGGTAAAACC GCTTTATGAT TCGCTGCATT GTTATGTGCG TGGTGAGCTC
AACGCGCAAT ACGGCGACGA TGTGGTGCCA AGAACCGGTC CAATCCCGGC ACATCTCCTG
GGTAACATGT GGGCCCAGCA GTGGGGCACC ATTTACCCTC TCGTTGCACC AAAGGATGCT
GACCCAGGCT ATGACGTGAC AGCCCTGCTT GCCAAACAGG GTTACGATGA GCACAAAATG
GTGCAGCAGG CCGAGAGCTT CTTTACTTCA CTGGGTTTTG ACAAGCTCCC CGATACCTTC
TGGAGCCGTT CATTATTCGT GCAGCCCAAA GACCGTGATG TCGTCTGTCA CGCCTCTGCC
TGGGATTTGG ATAACGCGGA TGATATCCGT ATCAAGATGT GTATCCAGAA AACCGCAGAA
GACTTTACCG TGATCCACCA CGAGCTGGGC CACAACTTCT ACCAGCGTGC TTATAAGAAT
CAGCCTTTTA TCTTTAAAAA CAGCGCCAAC GATGGCTTCC ATGAAGCCAT TGGCGATACG
GTCGCCCTGT CCATCACACC CAAGTACCTG CAGCAGATTG GTCTGCTGGA TACGGTTCCC
GATGCGTCAA AAGACATTGG TCTGCTATTA AAACAAGCCC TGGACAAGGT CGCTTTCCTG
CCCTTTGGTC TGATGATTGA CCAGTGGCGC TGGAAGGTAT TCAGCGGTGA AATCACGCCT
GCGAACTACA ACCAGGCATG GTGGGATCTG CGCTTGAAGT ATCAGGGTGT GATGGCGCCT
GTTGCGCGAT CAGAAGCCGA TTTTGACCCG GGTGCAAAAT ACCACGTGCC GGGCAATGTC
CCTTACACCC GTTACTTCCT GGCTCACATT CTCCAATTCC AGTTCCACCG TTCCCTGTGC
GACGTGGCCG GTGACCAGGG CCCGGTGCAT CGCTGCTCGA TATACGGCAA CCAGGAAGCC
GGCGCCAAGC TCAATCAAAT GCTGGAAATG GGTTCGAGCA AGCCCTGGCC CGAAGCGTTG
GCCGTGGTGA CTGGAAAACA GGAAATGGAC GCCAGCGCCG TACTCGACTA TTTTGCGCCG
CTGAAAACCT GGCTCGACGA GCAAAACACC CACGCCAATC GCCAGTGTGG TTGGTAA
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| Protein sequence | MLRPAKLALG VALALGLSAC QDEQHSVAVN KDVAAVTAVS SNVSTQDAID FINQAEAELA
ALSLEANRAE WIYSNFITED TASLSAAVNE KVTATSVRLA TEAAKFAEVE LDAVNARKLN
MLRSALVLPS PLDPAKNAEL AGIVAQLNGL YGKGKYCFAD GRCLTQPELS ALMAESRDPE
LLKEIWAGWR DIAKPMRPLF EREVVLANEG AKDLGFANLS ELWRSQYDMA PDAFSTELDR
LWGQVKPLYD SLHCYVRGEL NAQYGDDVVP RTGPIPAHLL GNMWAQQWGT IYPLVAPKDA
DPGYDVTALL AKQGYDEHKM VQQAESFFTS LGFDKLPDTF WSRSLFVQPK DRDVVCHASA
WDLDNADDIR IKMCIQKTAE DFTVIHHELG HNFYQRAYKN QPFIFKNSAN DGFHEAIGDT
VALSITPKYL QQIGLLDTVP DASKDIGLLL KQALDKVAFL PFGLMIDQWR WKVFSGEITP
ANYNQAWWDL RLKYQGVMAP VARSEADFDP GAKYHVPGNV PYTRYFLAHI LQFQFHRSLC
DVAGDQGPVH RCSIYGNQEA GAKLNQMLEM GSSKPWPEAL AVVTGKQEMD ASAVLDYFAP
LKTWLDEQNT HANRQCGW
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