| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1816 |
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| Symbol | |
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| ID | 4604066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2212338 |
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| End bp | 2213024 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639781184 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_927691 |
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| Protein GI | 119774951 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0241637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.594701 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTAATT TAAACGAGTG TTTTAAATTA ATCATAGGTC ACGGAATGGC GAATCGATCC
GACACCAAAA CCCGAATTCT TGACGCAGCG GAAAAGTTGT TCGCGGAGCG GGGGTTTTCA
GAGACCTCCC TGAGGCTCAT TACCAGTAAG GCTGAAGTGA ACCTGGCCTC GGTCAACTAC
CATTTCGGCT CCAAAAAAGA GCTTATTCGT GCTGTGCTTG CCCGTTATCT CGACGTGTTT
ATGCCTGGCG CATCAACAGA GCTGACAAAG CTCGTTCAAA ACAACGAAAA CGCCTCACTT
GAGACTATTT TCTCGGCGCT GGTGAGGCCG CTGTTGGACC TTAACAAGGT GCGAACAGAA
GGCACCCGAA TTTTTCTACA GTTACTTGGC CGTGGTTATA TTGAAAGCCA GGGCCATTTA
CGCTGGTTTA TTACTACTCA TTATGGTGAG CACCTGGACC GTTTTGTTCA GGTCGTCAGC
CAGAGCGCGC CTCACATTCC GCCAGCAGAG ATGTTTTGGC GTCTACACTT CACCCTGGGA
ACAGTCGTCT TCACCATGGC CTCTTCCGAT GCCCTGATGG AAATTGCTGA AGCCGACTTC
AAAGAACAGA ACGACATAGA GTCTGTTATC CGTAAAGTCA TTCCCTATAT GGCCGCCGGC
GTTGCCGTCC CGGTCAGCAA GGCATAA
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| Protein sequence | MINLNECFKL IIGHGMANRS DTKTRILDAA EKLFAERGFS ETSLRLITSK AEVNLASVNY
HFGSKKELIR AVLARYLDVF MPGASTELTK LVQNNENASL ETIFSALVRP LLDLNKVRTE
GTRIFLQLLG RGYIESQGHL RWFITTHYGE HLDRFVQVVS QSAPHIPPAE MFWRLHFTLG
TVVFTMASSD ALMEIAEADF KEQNDIESVI RKVIPYMAAG VAVPVSKA
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