| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1810 |
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| Symbol | |
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| ID | 4604060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2203018 |
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| End bp | 2204844 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781178 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_927685 |
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| Protein GI | 119774945 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.965283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.98697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCCCG TAGTCAAATC GGTGACCGAC AGGATCATCG AACGCAGTAA AGAAAGTCGC
AGTGCTTATC TGGCCGCGCT GCAGGAAGCC CGCAGTGGAA AGGTTCATCG CTCTGCCTTG
AGTTGCGGCA ACCTGGCCCA TGGTTTCGCC GCCTGTGGCG CAGAAGATAA ACAGTCGCTG
CGCCAACTCA CCAAGGTCAA TATTGGCATT GTGACTGCGT TTAACGACAT GTTGTCTGCC
CATCAGCCTT ATGAACATTA TCCTGAGCTG CTCAAAGCCG CCTGTAATGA AGTAGGCAGT
GTTGCCCAGG TGGCCGGTGG CGTACCCGCC ATGTGTGACG GTGTAACTCA GGGCCAACCC
GGGATGGAGC TGTCGCTGCT GTCCCGTGAG GTGATAGCCA TGGCGACCGC CGTAGGCTTA
TCCCACAACA TGTTTGATGG CGCGCTGCTG CTTGGGGTGT GTGACAAAAT CGTGCCCGGC
TTGCTGATTG GTGCAATGAG TTTTGGCCAC CTTCCAATGC TGTTTGTACC TGCGGGGCCC
ATGCGCTCAG GCATTCCCAA TAAGGAAAAA GCCCGTGTGC GTCAAAAATT CGCTGAGGGT
AAGGTGGACC GCGAAGCCTT GCTCGAAGCC GAGGCAAGCT CTTATCACAG TGCCGGTACC
TGTACCTTCT ATGGTACTGC CAACTCCAAT CAACTGGTGC TCGAGGTGAT GGGGCTGCAA
CTGCCAGGCT CATCCTTTGT GAACCCGGAC GACCCACTGC GAACCGAACT CAGCAAAATG
GCCGCCAAGC AGGTTTGTCG CCTGACCGAA AACGGGCTGC AGTATTCACC CATAGGTGAG
ATAGTCAACG AAAAATCCGT GGTTAACGGC ATAGTTGCGC TGCTTGCCAC CGGAGGTTCA
ACCAACCTGA CCATGCACAT AGTGGCTGCG GCCAGGGCCG CCGGTATCAT CATCAACTGG
GATGACTTTT CCGAGCTGTC TGATGCCGTT CCTCTGCTGG CCCGTGTTTA TCCCAACGGT
CACGCGGATA TCAATCACTT CCATGCGGCG GGCGGTATGG CCTTCCTGAT GAAAGAACTG
CTGGATGCAG GTCTTATCCA CGAAGATGTC AATACAGTGG CAGGCTACGG TCTGCGCCGT
TACACCCAGG AGCCAAGACT CATTGATGGT CAGCTCACCT GGGTTGATGG TCCTGTTACC
AGTCTGGACC AAGAGGTACT GCGCGGTGTT GCAGAGCCAT TCCAGTCAAA TGGCGGCCTT
AAACTGATGA AAGGCAACCT TGGTCGCGCC GTTATCAAAG TCTCGGCAGT CCAGGAGCAG
CATCGTATCG TCGAAGCCCC AGCGGTGGTC ATTGATGATC AGAACAAACT GGATGCCCTC
TTTAAAGCCG GTGAGCTTGA TAGAGACTGT GTGGTTGTGG TGAAAGGTCA GGGACCCAAA
GCTAATGGCA TGCCTGAGCT GCACAAACTA ACCCCCATCC TGGGTACCTT GCAGGACCGC
GGTTTTAAAG TGGCGTTGAT GACCGATGGT CGTATGTCCG GTGCATCAGG CAAAGTACCT
GCGGCAATCC ACCTTACGCC TGAGGCTCTG GATGGCGGTC TTATCGCCAA GGTTCAGGAC
GGTGACCTTA TCCGTATCAA TGCCATTACC GGTGAACTGT CCTTGCTGGT CTCGGCTCCC
GAGCTTGAAA GCCGCACTGC CGCACCGGTG GAATTAAGAA AGTCCCGTTA TGGCATGGGC
AGGGAACTTT TCGGCGCGCT CAGACAAAAT CTCAGCAGTC CCGAAACCGG TGCCCGTTGC
ACCGAAGCAA TCGATGAACT TTATTGA
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| Protein sequence | MHPVVKSVTD RIIERSKESR SAYLAALQEA RSGKVHRSAL SCGNLAHGFA ACGAEDKQSL
RQLTKVNIGI VTAFNDMLSA HQPYEHYPEL LKAACNEVGS VAQVAGGVPA MCDGVTQGQP
GMELSLLSRE VIAMATAVGL SHNMFDGALL LGVCDKIVPG LLIGAMSFGH LPMLFVPAGP
MRSGIPNKEK ARVRQKFAEG KVDREALLEA EASSYHSAGT CTFYGTANSN QLVLEVMGLQ
LPGSSFVNPD DPLRTELSKM AAKQVCRLTE NGLQYSPIGE IVNEKSVVNG IVALLATGGS
TNLTMHIVAA ARAAGIIINW DDFSELSDAV PLLARVYPNG HADINHFHAA GGMAFLMKEL
LDAGLIHEDV NTVAGYGLRR YTQEPRLIDG QLTWVDGPVT SLDQEVLRGV AEPFQSNGGL
KLMKGNLGRA VIKVSAVQEQ HRIVEAPAVV IDDQNKLDAL FKAGELDRDC VVVVKGQGPK
ANGMPELHKL TPILGTLQDR GFKVALMTDG RMSGASGKVP AAIHLTPEAL DGGLIAKVQD
GDLIRINAIT GELSLLVSAP ELESRTAAPV ELRKSRYGMG RELFGALRQN LSSPETGARC
TEAIDELY
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