| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1808 |
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| Symbol | |
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| ID | 4604058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2200983 |
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| End bp | 2201996 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781176 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) |
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| Protein accession | YP_927683 |
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| Protein GI | 119774943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0205619 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.551559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC GCGTAGCAAT TAACGGCTAT GGCCGTATCG GCCGCAACGT ACTGCGTGCT
CTGTACGAAA GCGACAAAGA CTACCCAATC GAAATCGTTG CCATCAACGA TCTCGGCGAC
GCCTCCATCA ATGCTCACCT GACCAAATAC GACTCTGTAC ACGGTCGTTT TAACGCCAAA
GTTGAAAACG ATGCAGAAGC CATTTACGTC AACGGCGACA AAATCCTCAC CTTCTCTGAG
CGTGACCCAG CCAAGCTACC ATGGGCCGAC CTCAAGGTTG ATGTGGTATT TGAATGTACC
GGTATCTTCA CTTCCAAAGA AGCCGTACAG CCACACCTGA ATGCCGGTGC CAAGAAAGTC
ATCATCTCAG CCCCCGGCAA GAACGTGGAC GCCACCGTAG TTTACGGTGT TAACCAGCAG
GTCTTGACCA GTGACATGAC AGTTATCTCT AACGCGTCAT GTACTACCAA CTGCCTGGCG
CCTTTTGCCA AGCCACTTAA CGATGCCATT GGTATTGAGT CAGGCCTGAT GACCACCATC
CACGCCTACA CCAACGACCA GCGTCTGTCT GACGTGTATC ACAGCGACCT GCGCCGAGCC
CGTGCTGCTG CCATGTCCAT GATCCCAACC AAGACTGGCG CTGCAGCTGC CGTAGGTCTG
GTGGTTCCTG AGCTGCAAGG CAAGTTCGAT GGTCTGGCGG TTCGCGTACC TACTGTGAAC
GTGTCTCTTG TTGACCTGTC ATTCATCGCC TCTCGTGACA CCACAGTAGC CGAAGTGAAT
GACATCATCG AAAAAGCACT GGCTGCCGAT GAAGTTCTGA GTCAGGTTCT GGCGGTAAAC
AAAGAGCCTC TGGTGTCTAT CGACTTCAAC CATAACGCCT ATTCTTCCAA CTTTGACGCA
ACCCAAACCC GAGTGAGTGG TCGTCTGGTG AAAGTGATGG CTTGGTACGA CAACGAGTGG
GGCTTCAGCA ACCGTATGCT GGACAACGCC GTTGCATTGA TGAACGCCAA ATAA
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| Protein sequence | MTIRVAINGY GRIGRNVLRA LYESDKDYPI EIVAINDLGD ASINAHLTKY DSVHGRFNAK
VENDAEAIYV NGDKILTFSE RDPAKLPWAD LKVDVVFECT GIFTSKEAVQ PHLNAGAKKV
IISAPGKNVD ATVVYGVNQQ VLTSDMTVIS NASCTTNCLA PFAKPLNDAI GIESGLMTTI
HAYTNDQRLS DVYHSDLRRA RAAAMSMIPT KTGAAAAVGL VVPELQGKFD GLAVRVPTVN
VSLVDLSFIA SRDTTVAEVN DIIEKALAAD EVLSQVLAVN KEPLVSIDFN HNAYSSNFDA
TQTRVSGRLV KVMAWYDNEW GFSNRMLDNA VALMNAK
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