Gene Sama_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1802 
Symbol 
ID4604052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2193985 
End bp2194581 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content50% 
IMG OID639781168 
Producthypothetical protein 
Protein accessionYP_927677 
Protein GI119774937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.306742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTCGG CCCCGGCATT CGCCACGACC GTTTCGTTGG AGTACAGCGG ATTTCATGAC 
AGATTGAAGC TGGTTAAAAA GGGCGATTTC CCAAGAACGG AACTTACCTT TTCGGTGCCC
ATGAAAGAAG GCTGCAAGAT AGTGAAGGGC GAAATTACCA CTGAGTCTAA ACGCTTTCCG
CTTACCATTA CGGATGACCA GCGGTTGTTT GTGCCCTTTG ACGATGATTT AAAGCTGGCA
AGGGCGCTGG TTAACATAGA AACAGATGGC GACGCGTCAA CGTGTGGGTT AAGCCTGCAA
GTAAGAGAGC GGGTTCCCCA AAAGCAGTAT TCCGGCGACA TGCTTGCGGC ACTTAAATCG
GAAATGGACA GCTTGCAGGC CTCTTTGCAG GGCTTCCCAA TGAAGTACTT TGCCCGCCCT
TCAAACGGGA TTCGATTTGA GTTTGCCCAA GAAGGTCGGT TAGCCACGGT GGATGGTAGC
GAAAAGCGAC TGTCAAAAGC GTTTATCCTG ACGAGTGAAG AGCTGGACGG TATTTCTCAA
CTTAGCTTCT CAGACGCACC ACAGATAGTC AGCCCTTGGT ACGCACAAAC CAAATAG
 
Protein sequence
MLSAPAFATT VSLEYSGFHD RLKLVKKGDF PRTELTFSVP MKEGCKIVKG EITTESKRFP 
LTITDDQRLF VPFDDDLKLA RALVNIETDG DASTCGLSLQ VRERVPQKQY SGDMLAALKS
EMDSLQASLQ GFPMKYFARP SNGIRFEFAQ EGRLATVDGS EKRLSKAFIL TSEELDGISQ
LSFSDAPQIV SPWYAQTK