Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1794 |
Symbol | |
ID | 4604044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2186168 |
End bp | 2187145 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781160 |
Product | cytochrome c oxidase, cbb3-type, subunit III |
Protein accession | YP_927669 |
Protein GI | 119774929 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | [TIGR00782] cytochrome c oxidase, cbb3-type, subunit III |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.448855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0580758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGATGA GTAACTTCTG GAGTATGTGG ATTAGCATAC TCACTATCCT GGTGATCATA GGCTGCTTCG TGCTGCTGAG GATCTGTTCC AAGAACACGA CGCCTGATAT TAAAGAAGGC GAGTCAATGG GCCACAGTTT CGATGGTATC GAAGAGCTGA ATAACCCACT GCCTAAGTGG TGGAGCTACA TGTTCTACAT CACTATCGTG TTTGGTGTGA TTTATCTGGC GCTGTATCCA GGTCTGGGTA ACTTCAAAGG TTTCCTGGGT TGGAGCAGCT CTAACCAGAG CATTGGTACT GAGCAAGGTA TTAAAGCCGA CTCTAAAGCC GCCATTGAAA ACGCAGCCAA AGAAGGTCGC TGGGTTCAGT ACGATGTTGA AGTGAAGAGT GCTGACGACA AATACGGTCA CATTTTCAAA GAATACGCGG CAACGCCACT GGAAGAACTG GTGAAAAACC CAGAAGCGCT GAAAGTGGGG GGTCGTCTGT TCCTGCAAAA CTGTGCCCAG TGTCACGGCT CTGACGCCCG CGGTAGCACT GGCTTCCCTA ACCTGACCGA TGCCGATTGG CTGTACGGTG GCGATCTGGC TACCATCAAG GCCAGTATCA TGAATGGTCG TCGTGGCATG ATGCCTCCAA AGGGTGGCTT GCCTATCGAT GACAGTGAAA TCCCAGGCCT GGCTGAGTAT GTCGTCAGCC TGTCCGGTGG TGAGCACGAT GCTGCGCTTG CCGCTCAAGG TCAGGGTTCT TTCATGAAGG GCTGTTTTGC CTGTCACGGT ATGGATGCCA AAGGCAACAA GTTCATGGGC GCGCCTAACC TGACAGACAA CGTATGGCTC TATGGCAGCA GCCGCGGCAA GATTGAAGAA TCAATCAAAT TCGGCCGCGC CGGCGTAATG CCTGCATGGA AAGACGTTCT GGGCGAAGAA AAAGTCCACG TCATCACTGC CTACGTTTAC AGCTTGTCTA ACAAGTAA
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Protein sequence | MLMSNFWSMW ISILTILVII GCFVLLRICS KNTTPDIKEG ESMGHSFDGI EELNNPLPKW WSYMFYITIV FGVIYLALYP GLGNFKGFLG WSSSNQSIGT EQGIKADSKA AIENAAKEGR WVQYDVEVKS ADDKYGHIFK EYAATPLEEL VKNPEALKVG GRLFLQNCAQ CHGSDARGST GFPNLTDADW LYGGDLATIK ASIMNGRRGM MPPKGGLPID DSEIPGLAEY VVSLSGGEHD AALAAQGQGS FMKGCFACHG MDAKGNKFMG APNLTDNVWL YGSSRGKIEE SIKFGRAGVM PAWKDVLGEE KVHVITAYVY SLSNK
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