| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1792 |
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| Symbol | |
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| ID | 4604042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2185377 |
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| End bp | 2185982 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781158 |
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| Product | cbb3-type cytochrome c oxidase subunit II |
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| Protein accession | YP_927667 |
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| Protein GI | 119774927 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
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| TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0336938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.113266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCA ACCATGAATT AATTGAGAAA AACATCGGTT TGCTCGGTAT CTTCACCGTG
CTGGTGATCA GCATCGGTGG TCTGGTGCAA ATCACACCTC TGCTGTTCCA GAAAGATACC
ACTGAGCCAG TAAAAGGCCT GCGTCCTTAC ACTGCACTCG AGCTCGAAGG CCGTGACATC
TATATCCGTG AAGGTTGTTA CAACTGTCAC AGCCAGATGA TCCGTCCCCT GCGTGCTGAA
ACTGAACGTT ACGGTCACTA CTCTGTAGCC GGCGAATCTG TATGGGATCA CCCCTTCCAG
TGGGGCTCCA AGCGTACTGG TCCTGACCTG GCCCGAGTAG GCGGTCGTTA CAGCGATAAA
TGGCACGAAG TTCACCTGAT TGACCCTCGC GCTGTGGTTC CTCAGTCAAA CATGCCTGGC
TTCCCATGGC TGGCAGACAA CAAGCTCGAT GGCAAGTTGA CTGCACAGAA AATGGAAGTC
TTCCGTGGAT TTGGCGTTCC CTACACCGAT GCTGACATTG CCAACGCTCA GAAAGCCGTA
GAAGGCAAAA CTGAGATGGA AGCCATCATC GCGTACTTGC AGTCTCTGGG ACACGCACTC
AAATAA
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| Protein sequence | MKFNHELIEK NIGLLGIFTV LVISIGGLVQ ITPLLFQKDT TEPVKGLRPY TALELEGRDI
YIREGCYNCH SQMIRPLRAE TERYGHYSVA GESVWDHPFQ WGSKRTGPDL ARVGGRYSDK
WHEVHLIDPR AVVPQSNMPG FPWLADNKLD GKLTAQKMEV FRGFGVPYTD ADIANAQKAV
EGKTEMEAII AYLQSLGHAL K
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