Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1792 |
Symbol | |
ID | 4604042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2185377 |
End bp | 2185982 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781158 |
Product | cbb3-type cytochrome c oxidase subunit II |
Protein accession | YP_927667 |
Protein GI | 119774927 |
COG category | [C] Energy production and conversion |
COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0336938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.113266 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCA ACCATGAATT AATTGAGAAA AACATCGGTT TGCTCGGTAT CTTCACCGTG CTGGTGATCA GCATCGGTGG TCTGGTGCAA ATCACACCTC TGCTGTTCCA GAAAGATACC ACTGAGCCAG TAAAAGGCCT GCGTCCTTAC ACTGCACTCG AGCTCGAAGG CCGTGACATC TATATCCGTG AAGGTTGTTA CAACTGTCAC AGCCAGATGA TCCGTCCCCT GCGTGCTGAA ACTGAACGTT ACGGTCACTA CTCTGTAGCC GGCGAATCTG TATGGGATCA CCCCTTCCAG TGGGGCTCCA AGCGTACTGG TCCTGACCTG GCCCGAGTAG GCGGTCGTTA CAGCGATAAA TGGCACGAAG TTCACCTGAT TGACCCTCGC GCTGTGGTTC CTCAGTCAAA CATGCCTGGC TTCCCATGGC TGGCAGACAA CAAGCTCGAT GGCAAGTTGA CTGCACAGAA AATGGAAGTC TTCCGTGGAT TTGGCGTTCC CTACACCGAT GCTGACATTG CCAACGCTCA GAAAGCCGTA GAAGGCAAAA CTGAGATGGA AGCCATCATC GCGTACTTGC AGTCTCTGGG ACACGCACTC AAATAA
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Protein sequence | MKFNHELIEK NIGLLGIFTV LVISIGGLVQ ITPLLFQKDT TEPVKGLRPY TALELEGRDI YIREGCYNCH SQMIRPLRAE TERYGHYSVA GESVWDHPFQ WGSKRTGPDL ARVGGRYSDK WHEVHLIDPR AVVPQSNMPG FPWLADNKLD GKLTAQKMEV FRGFGVPYTD ADIANAQKAV EGKTEMEAII AYLQSLGHAL K
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