| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1783 |
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| Symbol | |
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| ID | 4604033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2174802 |
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| End bp | 2175704 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781149 |
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| Product | putative DNA-binding transcriptional regulator |
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| Protein accession | YP_927658 |
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| Protein GI | 119774918 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0501585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTCGG AACAATCGCT GGAGTTGGTC GATATCGTTG CTCAGGTCGG TAGTTTTACC
GCTGCAGCGG CAAAGTTGCA CAAGGTGCCT TCCGCGGTCA GCTATGCAAT CAAGCAAATC
GAAGACGAAT TGGGTGTGGT ACTGTTTAAC CGCCATCACC GTAGCGTGAG TCTGACGGTA
GCCGGTGAGC ACTTCGTCCG TGAAGCCCGC GCCATGCTAT CGCAAATGGA TGAACTCAAG
CGCGGAACAC AGCGTATTGC CAATGGCTGG CAACCAACCC TGTCCATCGC GCTGGACAAC
ATTGTCCGAG CAGACAAGAT AAGCGTGTTA ATCGCTGATT TTTACAGGCA TTTTCAGGAT
GTCGAGTTAA TCATACGCAT CGAAGTATTC AACGGTGTAT GGGAAGCACT TGCTACAGGA
CGCAGCCACA TTGCCATTGG CGCTACAACG GCCATTCCCG TTGGTGGCGT ATTCCAATAC
CGGGACATGG GGGTTATCGA CTGGGCGTTT TTGGTGTCTA AAAATCACCC TCTTGCGTCC
ATAGAGGCAC CGTTAAGCGA TGATATGCTA AGGCCATTCC CCTCCATTTG TCTTGAAGAT
ACATCGCGGG AAATTCCCAA ACGTACGACC TGGCTTTTGG ACAATCAACG TCGGCTGGTT
GTGCCGGACT GGATCCGTGC CATTAACTGT TTCACCAACG GCTTGGGAAT AGGTTACATG
CCAAGACACC TTGCGGCGCC CTTTATTCAG GCCGGATTGT TGATGGAAAA AACACTTGAG
CAGCCAAAGG CGCCCAGTCC TTGCTGTCTG GCGTGGAACG GTGATGCGCC CTCGCCTGCA
CTCAGTTGGG TGCTTGATTA CCTCGGCGAC AGTGAAAAGC TGCACCGCGA ATGGCTGGCA
TAA
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| Protein sequence | MLSEQSLELV DIVAQVGSFT AAAAKLHKVP SAVSYAIKQI EDELGVVLFN RHHRSVSLTV
AGEHFVREAR AMLSQMDELK RGTQRIANGW QPTLSIALDN IVRADKISVL IADFYRHFQD
VELIIRIEVF NGVWEALATG RSHIAIGATT AIPVGGVFQY RDMGVIDWAF LVSKNHPLAS
IEAPLSDDML RPFPSICLED TSREIPKRTT WLLDNQRRLV VPDWIRAINC FTNGLGIGYM
PRHLAAPFIQ AGLLMEKTLE QPKAPSPCCL AWNGDAPSPA LSWVLDYLGD SEKLHREWLA
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