| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1782 |
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| Symbol | |
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| ID | 4604032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2174080 |
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| End bp | 2174736 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639781148 |
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| Product | hypothetical protein |
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| Protein accession | YP_927657 |
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| Protein GI | 119774917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0670] Integral membrane protein, interacts with FtsH |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.104064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0481152 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGG AAATTCTGGT TTCCAAGCAG TCGACACTGG AAGTCAACAA GCTCATCAAA
AACACCTATA TGTTGCTTTC CATGACACTG GCATTTTCAG CGCTGTGCGC CTGGATTGCC
ACGGCGATGG GCATTTCGCC TTTGATGTCT CTGGGTTTTG CCATCGGCGG ATTCATTCTG
CTGTTTGTCA CCCTGCGTAA AGCCGACACC GCAGCAGGTC TGTTTTGGGT ATTTGCCTTT
ACTGGTATGG AAGGCGCTTC ACTCGGTTTT ATCCTGAACC ACTATGCGGG CATGGCCAAT
GGCCCTGAAC TTATCATGCA AGCATTCGGC CTCACGTCAG CCATTTTTAT CGGCTTGTCC
ATGTATGCCC TCACCACTAA AAAAGACTTC TCTTTTATGG GTGGCTTTTT GTTCGCCGGT
TTAATTGTGA TTGTGATTGG TGGCCTGATT AATTTGTTCG TTGGCAACAG CACCGCGTAC
ATGCTGCTGT CCTGGGCAAC CGCTTTGGTG TTTACCGGTC TTATTCTGTT TGATACCAGT
CGCATCGTAA ACGGCGGCGA AACCAACTAT ATTCGCGCCA CTGTGTCGCT GTATCTGGAC
TTCCTCAATT TGTTCCTCGC TATTTTGCGC ATTCTTGGCA TGAACAACGA CGATTAA
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| Protein sequence | MSQEILVSKQ STLEVNKLIK NTYMLLSMTL AFSALCAWIA TAMGISPLMS LGFAIGGFIL
LFVTLRKADT AAGLFWVFAF TGMEGASLGF ILNHYAGMAN GPELIMQAFG LTSAIFIGLS
MYALTTKKDF SFMGGFLFAG LIVIVIGGLI NLFVGNSTAY MLLSWATALV FTGLILFDTS
RIVNGGETNY IRATVSLYLD FLNLFLAILR ILGMNNDD
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