| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1781 |
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| Symbol | |
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| ID | 4604031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2173637 |
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| End bp | 2174056 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781147 |
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| Product | DsrE-related protein |
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| Protein accession | YP_927656 |
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| Protein GI | 119774916 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1553] Uncharacterized conserved protein involved in intracellular sulfur reduction |
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| TIGRFAM ID | [TIGR03012] sulfur relay protein TusD/DsrE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.111826 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0472692 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCACT TCGAGGGCCA TTTTTTTATT ATGAGCACAT TTATTCTTCA GGTATCAGGT
AAAGCCTATG GTAGCGCAGC GCCCGTGCAC GCGCTCAGGT TTGCCAAGGC CGCAATCGAC
GAAGGCCACC ACATTCTTCA GGTATTTTTT TATCAGGATG GCGTGTTTAA CGCATCGAGC
CTCGGTTCGC CAGCATCCGA TGAGTTCAAC GTGTATCAGG CTTGGCAAAA ACTGGCCAAA
CTACACAATG TTGAACTGGT CAATTGCGTG TCTGCGGCCT TAAGACGAGG CATGGTGGCG
AAAGAAGAAG CTGAAACCCA AGGGCTCAGT CATTGGAATG TGGATGAACA TTTCACTAAC
GGCGGCCTGG GCGAGTTGGT AAGTGGCATC GCCAAAGCCG ACCGGCTCAT CTGTTTCTAA
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| Protein sequence | MAHFEGHFFI MSTFILQVSG KAYGSAAPVH ALRFAKAAID EGHHILQVFF YQDGVFNASS
LGSPASDEFN VYQAWQKLAK LHNVELVNCV SAALRRGMVA KEEAETQGLS HWNVDEHFTN
GGLGELVSGI AKADRLICF
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