Gene Sama_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1780 
Symbol 
ID4604030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2173271 
End bp2173627 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID639781146 
Producthypothetical protein 
Protein accessionYP_927655 
Protein GI119774915 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2923] Uncharacterized protein involved in the oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03010] sulfur relay protein TusC/DsrF 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.129474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0463669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAAAAC TCTGTGTTGT GTTTTCAACG TCGCCCCACA GCAATGCTGC TGGCCGGGAG 
GCACTGGATT TTGCCATGCT GGCAGCTAGT TATGATTTAG AAACCAGTTT ACTGTTCACC
GATGAAGGCG TACTGCACCT GATCTCTAAT CAAGAGCCGG AATCCATCGG TTGCCGCGAC
TACATAGCCA CCTTTGGTGC GCTGGAGTTT TACGATATCG AAAACCTTTA CGTGTGTGAG
GAAAGCCTGA AGGAATTCGC GATAGCGCCA AGCGCTCTGC CCCTGGATGT TCAAGTGCTG
ACAAACAGTG ATATCCGTGA ACATTTCGGC TCGGTCGATG AAGTGGTGGT GTACTGA
 
Protein sequence
MKKLCVVFST SPHSNAAGRE ALDFAMLAAS YDLETSLLFT DEGVLHLISN QEPESIGCRD 
YIATFGALEF YDIENLYVCE ESLKEFAIAP SALPLDVQVL TNSDIREHFG SVDEVVVY