Gene Sama_1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1779 
Symbol 
ID4604029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2172978 
End bp2173271 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content50% 
IMG OID639781145 
Producthypothetical protein 
Protein accessionYP_927654 
Protein GI119774914 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2168] Uncharacterized conserved protein involved in oxidation of intracellular sulfur 
TIGRFAM ID[TIGR03011] sulfur relay protein TusB/DsrH 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.2752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0452389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTGC ATCATATTCA AAGCTCATCT GCGCAAAGCG CCGGTCTTCG CCTCGCCCTT 
CGCTATGCGG GTAAGCAGGA TGCGCTGATA ATCAGTGGCA ATGCCACAGG CTCCCTGCTT
CATGCCAGTT GGCAGGCAAA ACTTGCCGGC AAAACTGTGT ATTTTTTAGA TGAAGATGTC
CATGCCCGGG GGCTGACAGC CATGATTACA GCACGTTACC CTGATGCGAA GTTGGTTGAT
TACCACGACT GGGTAAAACT CTCTTTAACG TTTGACAAGG TGATTACGTG GTAG
 
Protein sequence
MILHHIQSSS AQSAGLRLAL RYAGKQDALI ISGNATGSLL HASWQAKLAG KTVYFLDEDV 
HARGLTAMIT ARYPDAKLVD YHDWVKLSLT FDKVITW