| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1770 |
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| Symbol | |
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| ID | 4604020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2163974 |
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| End bp | 2165086 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781136 |
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| Product | alanine dehydrogenase |
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| Protein accession | YP_927645 |
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| Protein GI | 119774905 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0686] Alanine dehydrogenase |
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| TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000379801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0234483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATTG GTGTACCAAA GGAAATCAAA AACCATGAAT ATCGCGTTGG TATGGTTCCC
TCCAGCGTGC GTGAACTGAC CCTGCGTGGC CATGCGGTGT TCGTAGAGGC CACTGCCGGT
AGCGGTATTG GCTTTACAGA TCAAGACTAT ATCGACGCCG GTGCCACTAT TCTGGGCACA
GCAGAAGAAG TCTTTGCCAA AGCCGATATG ATTGTGAAAG TGAAAGAGCC TCAGGCCGTA
GAGCGCGCTA TGCTGCGTCA CGACCAAATC CTCTTCACCT ACCTGCACCT TGCTCCGGAT
CTGCCTCAAA CTGAAGAGCT GGTAAGCTCA GGCGCTGTTT GTATTGCTTA TGAAACTGTG
ACTGACGACC GTGGTGGTCT GCCACTGCTG GCACCAATGT CTGAAGTAGC CGGTCGCATG
TCTATTCAAG CCGGTGCCAT GGCGCTGGAA AAGTCTGCCG GCGGCCGCGG TATGCTGCTG
GGTGGCGTAC CGGGTGTTGA ACCTGCCAAA GTGGTTATCA TCGGTGGCGG TATGGTAGGT
ACCAACGCAG CTCAAATGGC CGTAGGTATG GGCGCCGATG TAGTCGTTCT TGATCGCTCT
ATCGATGCAC TGCGTCGTTT GAATGTACAG TTCGGCTCAT CTGTGAAAGC CGTATACTCA
ACCGCTGATG CCATCGAGCG TCACGTACTG GAAGCTGATC TGGTTATCGG CGGCGTACTT
ATCCCTGGTG CTGCTGCGCC CAAGCTGGTT ACTGCTGATA TGATCAAGCG CATGAAAGCT
GGCGCTGCTA TCGTTGACGT AGCTATCGAC CAGGGCGGTT GTGTAGAAAC TTCTCATGCT
ACCACCCACC AAGACCCAAC CTATATTGTT GACGACGTGG TTCACTACTG TGTAGCCAAC
ATGCCAGGTG CCGTTGCCCG TACTTCTACC TTTGCGCTGA ACAACGCCAC CCTGCCCTAC
ATCATCAAGC TGGCAGACAA GGGCTACAAG GCTGCACTGC TGGCCGATAA GCACCTGCTG
AACGGCCTCA ACGTGATGCA CGGCAAGATC ACCTGTAAAG AGGTGGCCGA AGCCCATAAC
CTGTCTTACG TTCCAGCTTC TGAATTGCTG TAA
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| Protein sequence | MIIGVPKEIK NHEYRVGMVP SSVRELTLRG HAVFVEATAG SGIGFTDQDY IDAGATILGT
AEEVFAKADM IVKVKEPQAV ERAMLRHDQI LFTYLHLAPD LPQTEELVSS GAVCIAYETV
TDDRGGLPLL APMSEVAGRM SIQAGAMALE KSAGGRGMLL GGVPGVEPAK VVIIGGGMVG
TNAAQMAVGM GADVVVLDRS IDALRRLNVQ FGSSVKAVYS TADAIERHVL EADLVIGGVL
IPGAAAPKLV TADMIKRMKA GAAIVDVAID QGGCVETSHA TTHQDPTYIV DDVVHYCVAN
MPGAVARTST FALNNATLPY IIKLADKGYK AALLADKHLL NGLNVMHGKI TCKEVAEAHN
LSYVPASELL
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