Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1769 |
Symbol | |
ID | 4604019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2162836 |
End bp | 2163789 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639781135 |
Product | thioredoxin reductase |
Protein accession | YP_927644 |
Protein GI | 119774904 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0492] Thioredoxin reductase |
TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000446804 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0215764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAG CCAAACACAG CCAACTGCTG ATCCTCGGAT CGGGCCCAGC TGGCTACACT GCCGCCGTCT ACGCTGCACG TGCAAACCTG AACCCAGTGA TGATCACAGG TCTCCAACAA GGTGGTCAGC TGACTACCAC GACCGAAGTT GAAAACTGGC CAGGTGATGC CGAAGGTTTG ACCGGACCAG GCCTGATGGC CCGTATGCAG GAGCATGCCG AAAAGTTCAA CACCGAAATT ATCTTCGACC ATATTAACGA AGTGACCCTC ACTGAACGTC CTTTCCGCTT GAAAGGTGAT AATGGCGAGT ACACCTGTGA TGCGCTTATC ATTGCCACCG GCGCATCGGC CAAGTACCTG GGGCTGCCTT CTGAAGATGC TTTTAAAGGT CGCGGCGTTT CAGCCTGCGC TACCTGTGAT GGTTTTTTCT ATCGCAATCA AAAGGTCGCA GTAATCGGTG GTGGTAACAC CGCGGTGGAA GAGGCCCTGT ATCTGTCCAA CATCGCCTCT GAAGTTCACC TCATCCACCG TCGTGACAGC TTCCGCTCAG AGAAAATTCT GATTGACCGT CTGATGGACA AGGTTGCAAA CGGCAACATC ATTCTGCATT TGGACAAGAC GCTGGATGAA GTGGTGGGCG ACAATATGGG TGTGACCGGT GTTAAGCTGA AATCCACCAA AGATGACTCT ACTGAAGCAT TTGATGTTGC GGGTGTTTTC GTCGCTATTG GTCACAGCCC CAATACCGGC ATCTTCGAGG GTCAGCTGGA GATGAACAAT GGTTACATCA AGGTGCAAAG CGGTCTGAAC GGCAATGCAA CCCAAACCAG CATCGAGGGC GTATTTGCTG CCGGTGATGT GATGGACCAA CACTATCGTC AGGCCATTAC CTCAGCCGGT ACCGGCTGTA TGGCTGCACT GGATGCCGAG CGTTATTTGG ACGCCAAGCA CTGA
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Protein sequence | MSQAKHSQLL ILGSGPAGYT AAVYAARANL NPVMITGLQQ GGQLTTTTEV ENWPGDAEGL TGPGLMARMQ EHAEKFNTEI IFDHINEVTL TERPFRLKGD NGEYTCDALI IATGASAKYL GLPSEDAFKG RGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAS EVHLIHRRDS FRSEKILIDR LMDKVANGNI ILHLDKTLDE VVGDNMGVTG VKLKSTKDDS TEAFDVAGVF VAIGHSPNTG IFEGQLEMNN GYIKVQSGLN GNATQTSIEG VFAAGDVMDQ HYRQAITSAG TGCMAALDAE RYLDAKH
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