| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1765 |
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| Symbol | |
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| ID | 4604015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2159575 |
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| End bp | 2161503 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639781131 |
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| Product | threonyl-tRNA synthetase |
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| Protein accession | YP_927640 |
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| Protein GI | 119774900 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0441] Threonyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0145935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0322125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAA TTACGCTTCC TGACGGCAGC CAACGTGTGT TTGCCAATCC CGTCTCCACT
ATGGACGTCG CTGCCGATAT CGGCCCTGGG CTTGCCAAGG CCTGTATTGC CGGCCGTGTA
AACGGTGAGC TGAAAGATGC CTGCGACCTC ATCCATGAAG ACGCCAGCCT GTCTATCATC
ACTGCCCGTG ATGAAGAAGG CTTGGAAATT CTGCGTCACT CCTGTGCACA CTTGCTTGGT
CATGCCATCA AGCAGCTTTG GCCACAAACC AAAATGGCCA TTGGTCCGGT TATCGATAAC
GGCTTCTACT ACGATGTGGA TCTTGAGCAC AAGCTGACTG CCGATGACAT CGCTGCGCTG
GAAAAGCGCA TGCTGGAGCT GGCCAAAACC GATTATGACG TGGTGAAACG CGTTGTGAGC
TGGCAGGAAG CCCGCGATAC CTTTGAAGGT CGCGGAGAAA GCTACAAGAT GGCGATTCTT
GATGAAAACA TTGCCAAGGA CGCCACCCCG GCGTTGTATC ATCACGAAGA ATACACTGAC
ATGTGTCGTG GCCCACACGT GCCCAACATG CGTTTTTGCC ATCACTTCAA ACTGATGAGC
GTTGCCGGTG CCTACTGGCG TGGTGATTCC AACAACAAGA TGCTGCAGCG CATCTACGGT
ACTGCCTGGG GTGATAAGAA AGCCCTGAAT ACCCACCTGG CGCGTCTCGA AGAAGCCGCC
AAGCGTGACC ACCGTAAAAT AGGCAAGCAA CTCGACCTGT ATCATATGCA GGAAGAAGCG
CCAGGTATGG TGTTCTGGCA TAACGATGGC TGGAGCATCT TCCGTGAGCT GGAAACCTTT
ATCCGCCACA AGCTGTCTGA GTACGATTAT CAGGAAGTGA AAGGTCCATT CATGATGGAC
CGCGTATTGT GGGAACGCTC AGGTCATTGG GATAAGTACG CCGATGCCAT GTTCACCACG
GCCAGTGAAA ACCGTGAATA CGCTATCAAA CCGATGAACT GCCCAGGTCA CGTGCAAATC
TTCAACCAGG GCCTCAAGTC GTATCGCGAT TTGCCACTGC GTATGGCCGA GTTCGGTTGC
TGTCACCGTA ATGAGCCATC GGGTTCGCTG CATGGCCTGA TGCGCGTACG CGGCTTTACC
CAGGACGATG CCCATATCTT CTGTACCGAA GAACAGGTAC AGGAAGAGGT AAGTGCATGT
ATCAGAATGG TGTATGACAC ATACTCGACC TTCGGTTTCG AAAATATTGT GGTGAAGCTG
TCTACCCGAC CCGAGAAGCG TATCGGTGAC GACGACATGT GGGACCGCGC AGAATCCGCT
CTGATTGAAG CCCTGAATGC CAACGGCATT GCCTTTGAAA TTCTGCCTGG CGAAGGTGCC
TTTTACGGTC CGAAAATTGA GTTCACCCTG CATGACTGTC TCGACCGTGC ATGGCAGTGC
GGAACCGTTC AGCTCGACTA CGCCTTGCCT GGCCGTTTGG GTGCGACCTA TGTGGCCGAA
GATAACGCCC GTCAGACCCC GGTGATGATC CACCGCGCCA TTTTGGGCTC TTTGGAGCGT
TTCATCGGTA TTCTTATTGA AGAATACGCC GGACGCTTCC CCGCATGGCT GGCTCCAGTG
CAGGCTGTCG TGATGAACAT CACCGACAAA CAGGCTGATT ATGTTGAAGA ATTAGTCAAA
TTCTTCAAAG AACAAGGTAT TCGCGCTTCT CAAGACTTGA GGAATGAGAA AATTGGCTTT
AAAATACGCG AGCACACCTT AAGGCGTGTC CCTTATCTAT TGGTTGTTGG CGACCAGGAA
ATGGAGAACA GGGAAATCGC GGTGCGTACC CGTGACGGTA AAGATTTGGG CAAGATGTCC
ATCGATGCTT TCGTTGCGAG CGTAAAAGAA CAAATTTCGC ACCGTAGTCT AAAACTGTTG
GAGGAATAG
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| Protein sequence | MPVITLPDGS QRVFANPVST MDVAADIGPG LAKACIAGRV NGELKDACDL IHEDASLSII
TARDEEGLEI LRHSCAHLLG HAIKQLWPQT KMAIGPVIDN GFYYDVDLEH KLTADDIAAL
EKRMLELAKT DYDVVKRVVS WQEARDTFEG RGESYKMAIL DENIAKDATP ALYHHEEYTD
MCRGPHVPNM RFCHHFKLMS VAGAYWRGDS NNKMLQRIYG TAWGDKKALN THLARLEEAA
KRDHRKIGKQ LDLYHMQEEA PGMVFWHNDG WSIFRELETF IRHKLSEYDY QEVKGPFMMD
RVLWERSGHW DKYADAMFTT ASENREYAIK PMNCPGHVQI FNQGLKSYRD LPLRMAEFGC
CHRNEPSGSL HGLMRVRGFT QDDAHIFCTE EQVQEEVSAC IRMVYDTYST FGFENIVVKL
STRPEKRIGD DDMWDRAESA LIEALNANGI AFEILPGEGA FYGPKIEFTL HDCLDRAWQC
GTVQLDYALP GRLGATYVAE DNARQTPVMI HRAILGSLER FIGILIEEYA GRFPAWLAPV
QAVVMNITDK QADYVEELVK FFKEQGIRAS QDLRNEKIGF KIREHTLRRV PYLLVVGDQE
MENREIAVRT RDGKDLGKMS IDAFVASVKE QISHRSLKLL EE
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