| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1749 |
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| Symbol | |
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| ID | 4605966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2139025 |
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| End bp | 2141085 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781113 |
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| Product | hypothetical protein |
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| Protein accession | YP_927624 |
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| Protein GI | 119774884 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3211] Predicted phosphatase |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.624168 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0119048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG CTACCCATAA TCCAAATTGT TTTAACCAAA GCAACAATAC CCCATTTGCC
GAGGTGCTGG ACCGTCATCT TTCTCGCCGC AACTTTGTAA AAAGCGGTCT GGGCCTTGGC
GCCATGACCG CATTTGCGGG TTTGGGCCTC GCAGGCTGTG GCAGTGATTC AAGCCCGGTA
ACGCCTCCAG TGACCACACC AACACCACTC CCTCCACCAA CCCAGTCAGA CATCACTCTG
GGCTTTGACT CCATTCCCGG TTCGCTCACC GATGGCGTTT CCATTCCCCA AGGCTACAGA
GCTCAGGTGC TGGCACCCTG GGGAACCCCG TTGAATGATA AGGCTGCCCC CTGGAAAGAC
GATGGCAGTA ATACGTCGGA CGATCAGGCC AATGCAGTGG GGCAGAACCA CGACGGTATG
CACTTTTTCC CACTGAATGA TGCCGCCGAC GATGGTCTGC TGTGCATCAA CCATGAATAC
ATTGAACCAG ATGCACTGCA TCCAACTGGC CCTAGTGTTG ACCCGGTCAC GGGCCTTCGC
ACCATCCTTG ATGAAGTGCG CAAGGAAATC AACGCTCACG GCGTGACTGT GGTACGTATC
AAACGCACCA ATGGCGTATG GGAAGTCATT AAAAACGATC CCCATAACCG CCGTTTTACC
GGTGCTACCA CATTTGATAT GTCAGGCCCT GTTGCATACA GCGATCATCT GGTTACCGCT
TTCTCGCCCG ATGGCAGTCA GACCCGAGGT ACCCTGAACA ATTGCGGTAA CGGTTCAACC
CCTTGGGGCA CCTACCTGAC CTGTGAAGAA AACTGGCCAG AATACTTCGT CAACAAAGGC
GAAATGTCTG CCGCCAACGC CCGTATCGGT GTTGCAACCA AGGACACCCG CTACGGATGG
AACCACTTTG CCGGCCACGA TGAAGAGCGG GCAGATGAAT TCAGCCGCTT CGACATCACC
CCAACCGGAA TAAGTGCCCT CTACGATTAC CGCAATGAAG CCAATGGTCA CGGCTATATC
GTTGAAATCG ACCCCTACAG TCCTAATCAG CGCGGTATCA AACGTACGGC CCTGGGTCGC
TTCCGCCATG AAGGGTGCAC CTTCGGTAAA CTCGAAGAGG GTAAGCCCGT TGTGTTCTAC
TCAGGGCACG ATTCCCGCTT TGAGTATCTT TACAAGTACG TATCAGATGC ACTTTGGTCT
GAGGCCGATG CCAACAGCAG CAACCGCATT GCTACCGGTG ATAAGTACAT GAATGACGGT
ACCCTCTACG TCGCACGCTT CGATGAGGAT GGCCAGGGCG AGTGGTTGCC ATTGGTGCCG
GGAACTGTCA CCACCGATGG CAAAACCCTG GGTGAGCATT TGGGGACACT TGCAGACATC
ATAGTCAACA CTGCAGGAGC AGCCGATCTG GTGGGGGCGA CCCCAATGGA TCGCCCAGAA
TGGTGTGCTG TCGACCCCTT CACCGGCAGT GTGTACCTGA CGCTGACAAA CAATACCCGA
CGCACCGAAG CCAATCCGGC CAACCCCCGC TTGAAAAATA GCTTTGGTCA CATCATTCGT
TGGAATGAAG GCGCCTCTGA TACCGAATTC AGTTGGGATA TCTTTGTCTT TGGTTCTCCG
GCCAACGGTG ACAGTGAAAC CAATCTCAGT GGCCTGACCG ATGAGAACCA GTTTGCAAGC
CCGGACGGCC TGGCATTTGA CCCACGTGGC ATCATGTGGG TACAAACCGA CAACGGAGCC
AAGGAAGTGA CTGAACACAC CAACGACCAG ATGCTGGCTG TGGTGCCCTC CAGGTTGCTC
GACGCAGAGG GCAATCAAAA ACCACTTCGC GCCGATAACC AAATGGAACT GCGCCGTTTC
TTCGTGGGTC CCAACGACTG TGAAGTGACA GGTGTAGCCT TCAGCCCTGA TTATCAAAGC
CTGTTTGCCA ATATCCAGCA CCCCGGCAAC TGGCCTTACA GTGACGATGC TACCCAGATT
ACCCCGGCCG GTATTAGCAT CAGGCCAAGG GCAGCCACTG TGGTTATCTC AAAAGTTGAT
GGCACCGAAG TGGGCGTGTA A
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| Protein sequence | MSKATHNPNC FNQSNNTPFA EVLDRHLSRR NFVKSGLGLG AMTAFAGLGL AGCGSDSSPV
TPPVTTPTPL PPPTQSDITL GFDSIPGSLT DGVSIPQGYR AQVLAPWGTP LNDKAAPWKD
DGSNTSDDQA NAVGQNHDGM HFFPLNDAAD DGLLCINHEY IEPDALHPTG PSVDPVTGLR
TILDEVRKEI NAHGVTVVRI KRTNGVWEVI KNDPHNRRFT GATTFDMSGP VAYSDHLVTA
FSPDGSQTRG TLNNCGNGST PWGTYLTCEE NWPEYFVNKG EMSAANARIG VATKDTRYGW
NHFAGHDEER ADEFSRFDIT PTGISALYDY RNEANGHGYI VEIDPYSPNQ RGIKRTALGR
FRHEGCTFGK LEEGKPVVFY SGHDSRFEYL YKYVSDALWS EADANSSNRI ATGDKYMNDG
TLYVARFDED GQGEWLPLVP GTVTTDGKTL GEHLGTLADI IVNTAGAADL VGATPMDRPE
WCAVDPFTGS VYLTLTNNTR RTEANPANPR LKNSFGHIIR WNEGASDTEF SWDIFVFGSP
ANGDSETNLS GLTDENQFAS PDGLAFDPRG IMWVQTDNGA KEVTEHTNDQ MLAVVPSRLL
DAEGNQKPLR ADNQMELRRF FVGPNDCEVT GVAFSPDYQS LFANIQHPGN WPYSDDATQI
TPAGISIRPR AATVVISKVD GTEVGV
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