Gene Sama_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1746 
Symbol 
ID4603996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2136187 
End bp2136513 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content51% 
IMG OID639781109 
Producthypothetical protein 
Protein accessionYP_927621 
Protein GI119774881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.657969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00769582 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCTCATC TCAGAATTCG TGGCCTTGCA TCTGACGCTG TGGCCCGATT AAGCCGTGAA 
TTGCCAGCAC GACTGGCCGC CATAACGGCG ACAGAGGTGT CAAGTTACAC TATGGAGTGG
ATCCCCAGTC AATTTTTCCA ACAGGGAGAG GCATGCCAAC CACTGGTCAT GGTGGAGGTG
CTTTGGTTTC AACGGAATGA ATCAACGCAG GACGACATGG AAGCCTGCAT TCGTGAACAC
CTTTTGGCTG AAACCCAATT GAGTGTTGCC GTTATTTTTA TTGGGTTGGA CAAGCGGGGT
TATTACCGTG ATGGCCGGCA CTTCTAA
 
Protein sequence
MPHLRIRGLA SDAVARLSRE LPARLAAITA TEVSSYTMEW IPSQFFQQGE ACQPLVMVEV 
LWFQRNESTQ DDMEACIREH LLAETQLSVA VIFIGLDKRG YYRDGRHF