| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1737 |
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| Symbol | ihfB |
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| ID | 4603987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2127929 |
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| End bp | 2128216 |
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| Gene Length | 288 bp |
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| Protein Length | 95 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781100 |
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| Product | integration host factor subunit beta |
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| Protein accession | YP_927612 |
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| Protein GI | 119774872 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00988] integration host factor, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000122677 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00231326 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTAAAT CCGAACTGAT CGAAAAACTC GCCACAAGGC AGTCGCAACT GTCGGCGAAA
GAAGTAGAGA GTGCAGTCAA GGAAATGCTG GAACAGATGG CCACTACGCT GGAAAGCGGT
GAGCGTATCG AGATCCGCGG CTTTGGCAGT TTCTCACTTC ATTATCGTGC GCCTCGTACT
GGCCGCAATC CCAAGACTGG TACGTCAGTC GAGCTGGAAG GCAAGTACGT TCCGCACTTT
AAGCCCGGCA AAGAGCTGCG CGAGCGTGTT GACGCTGTTA ACGTCTAA
|
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| Protein sequence | MTKSELIEKL ATRQSQLSAK EVESAVKEML EQMATTLESG ERIEIRGFGS FSLHYRAPRT
GRNPKTGTSV ELEGKYVPHF KPGKELRERV DAVNV
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