| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1727 |
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| Symbol | nrdB |
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| ID | 4603977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2112584 |
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| End bp | 2113759 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639781090 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_927602 |
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| Protein GI | 119774862 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.524183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00882047 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTTAACAG GGGGCTTTGC CCCCTTTTAC CGGAATAGAG AAATCATGGC TTACACTACT
TTTTGTCAAA CTCCCAACGA TGCAACCCGC GAACCTATGT TTTTCGGCCA GTCCGTTAAC
GTTGCCCGTT ACGATCAACA GCGCTATGAA GTATTTGAAA AGCTGATTGA AAAGCAGCTG
TCATTCTTCT GGCGACCAGA AGAAGTAGAC GTAAGCCGTG ACAAAATCGA TTTTGGAAAG
CTGCCTGATC ACGAAAGGCA CATCTTTATT TCCAATCTCA AGTACCAAAC CTTACTTGAC
TCTATTCAGG GCCGCAGTCC TAACGTTGCC TTCCTGCCTT TGGTGTCGCT GCCAGAGCTG
GAAACCTGGA TTGAAACCTG GTCTTTCTCT GAAACTATCC ACTCACGGTC ATACACCCAT
ATCATTCGCA ATATTGTGAA CGACCCTTCG TCGGTGTTTG ACGATATTGT CGTCAATGAA
GAGATCCTCA AGCGTGCCGG CGATATTTCG GCCTATTATG ACGAGCTCAT CAAGCTGACC
CAGATTTACC ATCTGCACGG CGAAGGCACC CACACGGTGG ATGGCCATGT GGTCGATGTA
ACTGTACGCG CCCTGAAAAA GGCTCTCTAC CTGTGCATGA TGTCGGTGAA CGCCCTGGAA
GCCATTCGTT TCTACGTCAG CTTTGCCTGT TCGTTCGCCT TTGCCGAGCG CAAGTTGATG
GAAGGCAACG CCAAAATCAT CCGTCTTATC GCCCGAGATG AAGCACTGCA CCTTAACTCG
ACTCAGCATA TCCTCAACAT CATGCAGGGC GGTAAGGACG ATGCAGAAAT GGCAGAAATC
GCCATTGAGT GTCAGCAGGA AGCCTACGAT CTGTTCCTGC GCGCTGCCGA GCAGGAAAAA
GAATGGGCCA AGTACCTCTT TAAAGATGGC TCCATGATTG GCCTGAACGA GCAAATTCTG
TGTCAGTACG TGGAGTACAT CACAAACCAG CGCATGAAGT CGGTCAACCT GCCTCTGCCA
TACCCAGAAT CCACCAACCC GCTGCCGTGG ATGAAAAACT GGCTCGAGAG CGATGCTGTT
CAGGTGGCAC CGCAGGAAGT GGAAGTATCC TCTTACCTGG TAGGCCAGAT TGACGCTTCC
GTCGATGAAA ATGAGTTCTC CGACTTTGAT CTTTAA
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| Protein sequence | MLTGGFAPFY RNREIMAYTT FCQTPNDATR EPMFFGQSVN VARYDQQRYE VFEKLIEKQL
SFFWRPEEVD VSRDKIDFGK LPDHERHIFI SNLKYQTLLD SIQGRSPNVA FLPLVSLPEL
ETWIETWSFS ETIHSRSYTH IIRNIVNDPS SVFDDIVVNE EILKRAGDIS AYYDELIKLT
QIYHLHGEGT HTVDGHVVDV TVRALKKALY LCMMSVNALE AIRFYVSFAC SFAFAERKLM
EGNAKIIRLI ARDEALHLNS TQHILNIMQG GKDDAEMAEI AIECQQEAYD LFLRAAEQEK
EWAKYLFKDG SMIGLNEQIL CQYVEYITNQ RMKSVNLPLP YPESTNPLPW MKNWLESDAV
QVAPQEVEVS SYLVGQIDAS VDENEFSDFD L
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