Gene Sama_1726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1726 
Symbol 
ID4603976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2112256 
End bp2112609 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID639781089 
Productiron-sulfur cluster-binding protein 
Protein accessionYP_927601 
Protein GI119774861 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.347237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00725733 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTTCTC CGACTTTGAT CTTTAAAAAG GCGCCCATCG TCAGCCTTCA GGGACAACCT 
GTGCTGCTGT TCAATGGACA GCAGCAGTCT TTGCTGGAGG CGCTCGAGAT CAAGAAAGTC
CGTGTCTTCT CAGAATGTCG AAGCGGCTTT TGCGGTGCCT GTAAAACCAA GGTACTCAGT
GGCTCAGTGA CGTATTTTAC CGAGCCACTG GCAGCGCTTT CTGCTGACGA ATGCCTGCCC
TGCTGCTGCG TACCTGAATC GGATTTAAAT TTGGCGCTCA GCCCCAAGGG CGCTGATACT
GTCGTGCATC CTCAGGCTCT CAATGCCAGA GCCAAGGCCG TTTTGGTCGA CTGA
 
Protein sequence
MSSPTLIFKK APIVSLQGQP VLLFNGQQQS LLEALEIKKV RVFSECRSGF CGACKTKVLS 
GSVTYFTEPL AALSADECLP CCCVPESDLN LALSPKGADT VVHPQALNAR AKAVLVD