Gene Sama_1721 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1721 
Symbol 
ID4603971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2105972 
End bp2106265 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content52% 
IMG OID639781084 
Producthypothetical protein 
Protein accessionYP_927596 
Protein GI119774856 
COG category[S] Function unknown 
COG ID[COG3139] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00790834 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0486869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT TGAATCAGCT GATTGATGAG ATGCCATTGG AAGTATACGA GCGCATGCGT 
TCGGCCGTTG AGCTTGGCAA ATGGGAAGAT GGCAGTGTAC TGACCGAAGC CCAGCGTGAA
AATGCCATGC AGGTCGTGAT GCTGTACCAG GCCCGGATGC TTGACCAGGA CGAACATTTC
ACCATCGCCC GCGGTGGCAG CATCAATGAG CTCTCCAAAA GCGAGTTGAA ACGTCGTATG
GCTTCGGATT TCGGTGGTGA AACCATCGCG ACCTTCAGTA ACGATGAAAT CTGA
 
Protein sequence
MKDLNQLIDE MPLEVYERMR SAVELGKWED GSVLTEAQRE NAMQVVMLYQ ARMLDQDEHF 
TIARGGSINE LSKSELKRRM ASDFGGETIA TFSNDEI