Gene Sama_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1720 
Symbol 
ID4603970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp2105658 
End bp2105975 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content54% 
IMG OID639781083 
Producthypothetical protein 
Protein accessionYP_927595 
Protein GI119774855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0324758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0484003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTAG TGCAATGTCC TGTCTGCAAT AAACGGATCT CGAGTAAGGC GCCCCAGTGT 
CCACACTGCA GCACCTCATC AGCAGGTGAC AATGAGTCGG CGCTGAGGAT TGCGCAGATC
AAAAAGTCGC AGCGCCTGAT GAACCAGAGT TTCATCACCA TGACCCTGTT TATCGGTGGC
GTAGTGGTGC TGTTTTGGGG CGGAGAAGAG CCCGAAGGTG TGCGTCTGAC GGCCGGTGCA
GTGCTATTGA CCCTGGGGTT TGTTGGCTAT CTGGTCACCC GAGTCCAGAT GGTGATAAAT
AAGCGGAAAA GTGTATGA
 
Protein sequence
MALVQCPVCN KRISSKAPQC PHCSTSSAGD NESALRIAQI KKSQRLMNQS FITMTLFIGG 
VVVLFWGGEE PEGVRLTAGA VLLTLGFVGY LVTRVQMVIN KRKSV