| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1709 |
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| Symbol | |
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| ID | 4603960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2088734 |
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| End bp | 2089912 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781072 |
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| Product | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) |
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| Protein accession | YP_927585 |
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| Protein GI | 119774845 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0560142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACG CATCAACAAA CCAAGAGACA GTGCACAAAG TCTCCTTCCT CGACAGGGAG
TCGCTGCACA TCCCCATTCT CAAGATCCTT CAGGCAGACG GCACTCCCTA CGAGCAAGCC
GTTCTGCCTC AAATCGATGA AGCCCTCGCC CAGCGCATCT ACGACGCCTG CGTGTTTACC
CGTGTGCTGG ATGAGCGCAT GTTGGGCGCA CAGCGCCAGG GCCGTATCAG TTTTTACATG
ACCTGTACCG GTGAAGAAGC GGCCATCCTC GGCAGCGTTG CGGCGCTGGA TGAGAAAGAC
GTTATTCTGG CCCAGTACCG TGAGCACGCC GCGCTGCGTT ATCGCGGTTT CACCACCGAG
CAGTTTATGA ACCAGATGTT CAGTAACGAA AAAGACCTCG GTAAGGGCCG CCAGATGCCC
ATTCACTACG GCACCGCAGC GCTGCATTAT CAAACCATTT CATCGCCACT GGGTACCCAA
ATCCCACAGG CGACTGGCGT GGGTTACAGC CTGAAGATGA AGGGCGAGCG TAATGTGGCT
ATTTGCTACT TTGGTGAAGG CGCCGCATCT GAAGGTGATT TCCACGCCGG CATGAACATG
GCTGCTGTGC TCAAGTCTCC GGTAATTTTC TTCTGCCGCA ACAACGGCTA TGCCATTTCC
ACCCCCACCG AAGAGCAGTT TGCCGGTAAC GGCATTGCCA GCCGCGGTGT GGGCTATGGC
ATGCATACTA TCCGCGTAGA TGGCAACGAT ATGCTGGCGG TACTCGCCGC TACCCAGCAG
GCCCGCGCCT ATGCACTGGA GCATAACGCG CCTGTGCTGA TTGAAGCCAT GACCTACCGT
CTTGGTGCTC ACTCAACCTC GGACGATCCT TCCGGCTATC GCTCCAAGGA AGAAGAGGCC
AAGTGGCGCG AGCACGATCC GGTGAAACGC TTCAAGCTGT GGATGATTAA TAAAGGTTGG
CTCGCCGAAG CCAACGATGA AGCCCTGTAT GAGCGCTACC GGGAAGAAGT CTTGGCCGCT
GTGAAAGTGG CTGAGAAGAT CCCGGCGCCC CGCATCGATG AGATCATTGA GGATGTTTAC
GATGAGCCAA CGCCGCTGCT GAAAAAGCAG CTGGAGTCAC TGAAGGCTCA CGTGAAGAAG
TATCCGCAAG CTTATCCAAA AACTGCAGGG AGACTCTAA
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| Protein sequence | MSNASTNQET VHKVSFLDRE SLHIPILKIL QADGTPYEQA VLPQIDEALA QRIYDACVFT
RVLDERMLGA QRQGRISFYM TCTGEEAAIL GSVAALDEKD VILAQYREHA ALRYRGFTTE
QFMNQMFSNE KDLGKGRQMP IHYGTAALHY QTISSPLGTQ IPQATGVGYS LKMKGERNVA
ICYFGEGAAS EGDFHAGMNM AAVLKSPVIF FCRNNGYAIS TPTEEQFAGN GIASRGVGYG
MHTIRVDGND MLAVLAATQQ ARAYALEHNA PVLIEAMTYR LGAHSTSDDP SGYRSKEEEA
KWREHDPVKR FKLWMINKGW LAEANDEALY ERYREEVLAA VKVAEKIPAP RIDEIIEDVY
DEPTPLLKKQ LESLKAHVKK YPQAYPKTAG RL
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