| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1708 |
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| Symbol | |
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| ID | 4603959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2087535 |
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| End bp | 2088581 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639781071 |
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| Product | succinylglutamate desuccinylase |
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| Protein accession | YP_927584 |
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| Protein GI | 119774844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2988] Succinylglutamate desuccinylase |
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| TIGRFAM ID | [TIGR03242] succinylglutamate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.370469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0550422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTAACC TACTGCAAGG CTGCAAAGAT TTTTTGCATC TTACCCTGTC CAATCCCGAA
CACCTTGACC CCATCGCCCC TCAACCTCTG TACGGACACA CCTTGGTCAG CCTCTGGGAT
ACAGGCGTGT TGGTATTCGA GCCTGTCGAT GGCAACAGCC ATAAAGACAT AGTGCTATCA
AGCGGCGTGC ATGGAAATGA AACCGCGCCT ATTGAACTCT GTAATGGCCT TATTCAGGAT
GTGCTGGAAG GACGTTTACA GGTCAAAGAG CGGGTATTGT TCCTCATTGG TAACCCTGCT
GCCATCAACA ATGGCACCCG TATCGTAGAT GAAAACATGA ACCGCCTTTT CAGCGGTGAG
CACAGCCGTG GGCCCGGACT CAGTAACCCC GAGCGGGTGC GGGCTAAAAA GCTTGAAACC
TATGTCACCC GTTTCTTTGA AAAAGGTGCG GAAAAAGGTG AGGGCAGGCA GCGTATTCAT
TACGATTTAC ACACGGCCAT CCGCGGCTCT AAGCATGAAA AGTTTGCTAT CTACCCTTAC
CGCCCCGGCC GCGCCTTCAG CGGTGAGCAA ATCATGTTCC TTGCGGCGAG TGGCGTTGAT
ACCGTGCTCT TTCACCACGA ACCGACCACG ACCTTCAGTT ATTTCTCCTC CGAGTTGTTC
CGTGCCGACG CCTTTACCAT AGAACTTGGC AAGGTCTACC CCATGGGGCA GAACGACATG
AGTAAGTTCG CCAATACCCG GGAGATGTTC AAGCGCCTGA TTTGCGCTGA GCCACTGGAG
CTTGCACCTT TTGATGAAAC CCAGGTGAAC CTCTATCAGG TGTGCAGGGT TATCAATAAG
GAAGTCGATG ACTTTGAATT TACCTTCAGC ACTGATGTCG AAAACTTCAG CGCTTTCCCG
CGTGGCCACG TGATAGCACG TCAGGGCGGC AAGGATATTC TTGTCGAGCA GGAAGCCGAG
GCGGTGGTGT TCCCCAACGC CAAGGTACCC GTGGGGCAGC GCACCGTCAT CATGCTGGTT
CCCGCGGTAA ATCCTCACGT GGAATAG
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| Protein sequence | MLNLLQGCKD FLHLTLSNPE HLDPIAPQPL YGHTLVSLWD TGVLVFEPVD GNSHKDIVLS
SGVHGNETAP IELCNGLIQD VLEGRLQVKE RVLFLIGNPA AINNGTRIVD ENMNRLFSGE
HSRGPGLSNP ERVRAKKLET YVTRFFEKGA EKGEGRQRIH YDLHTAIRGS KHEKFAIYPY
RPGRAFSGEQ IMFLAASGVD TVLFHHEPTT TFSYFSSELF RADAFTIELG KVYPMGQNDM
SKFANTREMF KRLICAEPLE LAPFDETQVN LYQVCRVINK EVDDFEFTFS TDVENFSAFP
RGHVIARQGG KDILVEQEAE AVVFPNAKVP VGQRTVIMLV PAVNPHVE
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