| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1692 |
|---|
| Symbol | |
|---|
| ID | 4603943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | + |
|---|
| Start bp | 2068718 |
|---|
| End bp | 2070841 |
|---|
| Gene Length | 2124 bp |
|---|
| Protein Length | 707 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639781055 |
|---|
| Product | glucosyltransferase MdoH |
|---|
| Protein accession | YP_927568 |
|---|
| Protein GI | 119774828 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2943] Membrane glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0828396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCCGG AGCGTCCGGC GGATATGCCC ACCCAGTCGC TTAAATCCCT GAGCGAAGGC
TTTCCCCGCA CACCCGTATC ACCTTCCGGT GTTAAGTCCA GCGCTCTGAA GCGCTGGTCT
GTGGTGGGCT CAGCACTCCT GTTGTCTGCA TTTGCTATTT ATGAAATGCG CGGGGTGTTT
ATGCTCGGAG GCCTGACGCC ATTGGAATAC CTGGTGTTGG TACTCTTTGC CATCAACTTC
TGTTGGATTG CCCTGGCATT TTGCGCAGGG ATTGCCGGGA TGATTTCTAT CATTCGTGGT
AAAAAGTCCG CAGTCGAAGA GGTGGAGCTC AATACCCGCA CCGCGATCCT GATGCCCACC
TACAACGAAT CCCCAGACCG GGTATTCGCC GCAGTGGAAA CCATGGCACT GGCACTTGCA
GATACGCCGG ATGGTCATGC CTTTGATTGG TTTATTCTCA GTGACACCAC AGATCCTGAG
GTGGCATTGG CCGAAGAGCA CGCCTTTTGG CTGCTTCGTG AAGCCACCGC AGGTAAGGCG
CGGGTGTATT ATCGTCGTCG CCGTAAAAAC GTTGCCCGCA AGGCCGGTAA CGTGGCGGAC
TTCTGTCGGC GCTGGGGCAG CAGTTACGAC CATTTGTTGG TGTTGGATGC CGACAGTGTG
ATGGAAACCT CCACCATAGT GTCGCTGGCA AGACGGATGC AGGCCGATCC GGATGCAGGT
CTGATCCAGA CCATTCCTGC ACTTATCAAG GGCACAACCC TGATGGCGCG GGTACAGCAG
TTTGCGGCCC GTTTTTATGG CCCAGTGATC GGCACTGGCT TGGCGTGGTG GGTACAAAAA
GAAGGTAACT TCTGGGGGCA CAACGCCATT ATCCGCACCG AAGCCTTTAT GAAGGCTGCC
GGTTTGCCCC ATTTGTCCGG TAAGCCTCCC TTCGGCGGCC ATATACTGAG CCATGACTTT
GTGGAAGCCG CGCTTATCCG CCGCGCCGGG TGGAGCGTGA AAATTGCTGC CGATCTCTAT
GGCTCCTACG AGGAGTGCCC GCCGTCGATT ATTGACATGG CAGTGCGCGA CCGTCGCTGG
TGTCAGGGCA ACCTGCAGCA TACCCGTGTC CTGCCCGCAA AAGGCCTGCA TTGGGTCAGC
CGCATGCACC TGGTCACGGG GATCATGTCT TATCTGTCAT CGCCATTCTG GCTGATGCTG
ATCCTCTCGG GTTTGTTGCT GGCGCTGCAG GCGCACTACA TACGCCCTGA GTACTTCTCG
GATCAGTTCT CGCTGTATCC CACTTGGCCA GTGATGGACT CCGACAGGGC ATTGCGCCTC
TTCTACATCA CTATGGGTGT ACTCTTTGGT CCTAAAATCT TCGGGTTGTT GCTGTTGGTG
TTTGACAACA AAACCTGTAA GGCATTGGGC GGCAGACTGC GCATCGCGCT GAGCACCATT
ACCGAAGTCA TACTCTCGGC CATGATTGCG CCCATTATGA TGTTTATTCA TTGTGGCGCC
GTGCTCTCCA TCCTCTTTGG CCGCGACAGT GGTTGGTCGC CCCAGCGCCG CGACGATGGC
AGTCTTCCCT GGAAAGACCT GATCTATCGC CACCGCTGGC ACATGATTGC AGGATTGCTG
CTGGGTTATG CCGCGGTACT CGACTCATTA ACCTTGCTGG CGTGGATGTC ACCGGCCCTG
GTAGGACTCT GGCTTGCCGT CCCCTTATCT GCCGTCACGG CATCTGGCCC CATCGGGCAA
TGGTTCAAGG ACAGAAAAAT TCTGGCCACC CCGGAAGAGG TGAATGAACC TGCCATAGTG
GCAGCAGCAA CAGCGCGGCG TGAATACTAT GCCGAAGCCC TGGGTGAAAG CTGGAATGTG
CCTATGCTGC TGGCGAATCC CGATATGATG GCGCTGCACA TGAGCATTAT GGATAAGTTG
CCCACCCATG TGCCCGGTAG CCCCATTGAG CCCCTTGAGG CGATTGCACG GGTTAAGGTG
CACGAAGCCC AGTGTCAAAC GAGTTTGCTG GCGCTCTTAA GCCGTCAGGA GCTTGGCTAT
GTGCTGGGTA ATCCCTTGCT GATGAAACAC ATGCAGCACT TGCCAGAAGC TTATGCCGAT
GACGATCTCG TGACTATCTG CTGA
|
|---|
| Protein sequence | MPPERPADMP TQSLKSLSEG FPRTPVSPSG VKSSALKRWS VVGSALLLSA FAIYEMRGVF
MLGGLTPLEY LVLVLFAINF CWIALAFCAG IAGMISIIRG KKSAVEEVEL NTRTAILMPT
YNESPDRVFA AVETMALALA DTPDGHAFDW FILSDTTDPE VALAEEHAFW LLREATAGKA
RVYYRRRRKN VARKAGNVAD FCRRWGSSYD HLLVLDADSV METSTIVSLA RRMQADPDAG
LIQTIPALIK GTTLMARVQQ FAARFYGPVI GTGLAWWVQK EGNFWGHNAI IRTEAFMKAA
GLPHLSGKPP FGGHILSHDF VEAALIRRAG WSVKIAADLY GSYEECPPSI IDMAVRDRRW
CQGNLQHTRV LPAKGLHWVS RMHLVTGIMS YLSSPFWLML ILSGLLLALQ AHYIRPEYFS
DQFSLYPTWP VMDSDRALRL FYITMGVLFG PKIFGLLLLV FDNKTCKALG GRLRIALSTI
TEVILSAMIA PIMMFIHCGA VLSILFGRDS GWSPQRRDDG SLPWKDLIYR HRWHMIAGLL
LGYAAVLDSL TLLAWMSPAL VGLWLAVPLS AVTASGPIGQ WFKDRKILAT PEEVNEPAIV
AAATARREYY AEALGESWNV PMLLANPDMM ALHMSIMDKL PTHVPGSPIE PLEAIARVKV
HEAQCQTSLL ALLSRQELGY VLGNPLLMKH MQHLPEAYAD DDLVTIC
|
|---|
| |