| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1688 |
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| Symbol | |
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| ID | 4603939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2062237 |
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| End bp | 2063772 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781051 |
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| Product | fumarate hydratase, class I, anaerobic, putative |
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| Protein accession | YP_927564 |
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| Protein GI | 119774824 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.890171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.152595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAGAGA ATCACTCGCC GGTCGTGATC AAGCAGGCCG ATTTTATTGA AAGTGTTGCG
GATGCACTGC AATACATCTC CTACTACCAC CCTAAAGATT TTATCGATGC CATGGCTGAG
GCCTACGAGC GTGAACAGAG CGCCGCCGCC AAAGACGCTA TCGCTCAAAT TCTGATTAAC
TCCCGCATGT CGGCCGAGGG CAAGCGTCCT CTGTGCCAGG ACACCGGCAT CGTGACCTGC
TTTGTGAAAG TGGGCATGGG TGTACAGTGG GACAAAACCG ACATGACAGT GCAGCAGATG
GTGGATGAAG GCGTTCGCCG CGCTTACACC AACCCGGATA ACCCGCTGCG CGCCTCCATC
GTTGCCGACC CTGCGGGCGC CCGTAAAAAC ACCAAGGACA ACACGCCTTC CGTGGTGCAT
ATCGACATGG TGCCAGGTAA CCATGTGGAA GTGGCCATTG CGGCCAAGGG CGGCGGCAGC
GAGAACAAAT CCAAGATGGT GATGCTGAAC CCATCCGACG ATATCGCCGC CTGGGTTGAA
AAGACGCTGC CAACCATGGG CGCTGGCTGG TGTCCTCCCG GTATGCTGGG CATAGGTATT
GGTGGTACCG CCGAGAAAGC CGCCGTGATG GCTAAAGAAG CCCTGATGGA AAGCATTGAT
ATCCATGAGC TTATGGCCAA AGGCGCTGAA ACTGCAGAAG AAAAACTGCG TCTGGATATT
TTTGAGCGTG CCAACGGTCT GGGGATTGGT GCCCAGGGCC TTGGCGGTTT GACCACAGTA
CTGGATGTGA AAATCAAATC CGCGCCTACC CACGCCGCCT CCAAGCCAGT AGTGATGATC
CCCAACTGCG CCGCGACCCG TCACGTGCAC TTCCACCTGG ATGGTACAGG TCCTGCCGAC
CTGTCTCCGC CAAGCCTCAG TGACTGGCCG GAAATTACCT GGGAAGTGGG TGAGAGCGTG
CGCCGCGTCA ACCTGGACAC AGTGACTCAG GCTGACATCG AAACCTGGAA GAGCGGCGAT
ACCCTGCTGC TGTCCGGTAA GATGCTCACC GGCCGTGACG CAGCCCACAA GCGTATTCAA
ACCCTGATTG AATCAGGCGA AGGCCTGCCG GAAGGTGTGG ATTTCACCGG CAAGTTCATC
TACTACGTGG GCCCGGTTGA TCCGGTAGGC GATGAAGTGG TGGGTCCTGC GGGCCCAACC
ACGGCAACCC GCATGGATAA ATTTACCGAT CTGATGTTGG ATAAGACCGG CCTGATGGGC
ATGATTGGTA AGGCCGAACG GGGTCCTGCC ACCGTAGAGT CTATCAAGCA GCACAAGGCG
GTTTACCTGA TGGCCGTTGG CGGCGCAGCC TACCTGGTGT CCAAAGCCAT TAAACACGCC
CGTGTGGTGG CCTTTGAAGA TTTGGGTATG GAAGCCATCT ACGAGTTTGA CGTGCAGGAT
ATGCCTGTGA CCGTGGCAGT GGACACTCAG GGTGTAAACG CCCACGAGAC AGGTCCGGCC
ATCTGGAAAG TGAACATCCA GAACGCCAAG GCGTAA
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| Protein sequence | MSENHSPVVI KQADFIESVA DALQYISYYH PKDFIDAMAE AYEREQSAAA KDAIAQILIN
SRMSAEGKRP LCQDTGIVTC FVKVGMGVQW DKTDMTVQQM VDEGVRRAYT NPDNPLRASI
VADPAGARKN TKDNTPSVVH IDMVPGNHVE VAIAAKGGGS ENKSKMVMLN PSDDIAAWVE
KTLPTMGAGW CPPGMLGIGI GGTAEKAAVM AKEALMESID IHELMAKGAE TAEEKLRLDI
FERANGLGIG AQGLGGLTTV LDVKIKSAPT HAASKPVVMI PNCAATRHVH FHLDGTGPAD
LSPPSLSDWP EITWEVGESV RRVNLDTVTQ ADIETWKSGD TLLLSGKMLT GRDAAHKRIQ
TLIESGEGLP EGVDFTGKFI YYVGPVDPVG DEVVGPAGPT TATRMDKFTD LMLDKTGLMG
MIGKAERGPA TVESIKQHKA VYLMAVGGAA YLVSKAIKHA RVVAFEDLGM EAIYEFDVQD
MPVTVAVDTQ GVNAHETGPA IWKVNIQNAK A
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