| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1684 |
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| Symbol | asnC |
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| ID | 4603935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2058084 |
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| End bp | 2059484 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639781047 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_927560 |
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| Protein GI | 119774820 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000115378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.235837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTG CATCTATCGC ATCCGTATTT AAGGGTGATT TCGCCCCCGG TACCGAGATC
ACGGTACGCG GTTGGGTTCG TACCCGTCGG GATTCCAAGG CAGGGATCTC CTTCCTCGCC
GTCTATGACG GCTCCTGTTT CGATGCCATT CAGGGCGTAG TGCCCAATGC TCTGTCCAAT
TATAATGACG AAGTGCTGAA GCTGACCGCT GGCTGCTCTG TGGAAATGAC CGGTAATCTG
GTGGAGTCTC CCGGCTCAGG CCAGGCATTC GAACTTCAGG CCACTGCCGT GAAAGTGACC
GGCTGGGTAG ACGATCCGGA CACTTACCCC ATGGCTGCCA AGCGCCACTC AATCGAGCAC
CTGCGCGACG TGGCTCACCT GCGTCCACGT ACCAACATCA TTGGTGCCGT GGCCCGTGTG
CGTAACTGTC TGTCTCAGGC CATTCACCGC TTCTACCACG AGAATGGTTT TATTTGGGTA
TCCACTCCCA TCATCACCGC CTCCGACTGT GAAGGCGCCG GTGAGATGTT CCGCGTCTCC
ACTCTGGACA TGGAAAACCT GCCACGTACC GACGCTGGCA AAGTAGATTA CGACCAGGAC
TTTTTCGGTA AAGAAGCCTT CCTGACCGTA TCGGGTCAGC TGAACGGCGA AACTTACGCC
TGTGCCCTGT CAAAAATCTA CACCTTCGGC CCAACCTTCC GCGCCGAAAA CTCCAACACC
AGCCGTCACC TGGCGGAATT CTGGATGGTG GAGCCGGAAG TGGCCTTTGC CGATCTGAAC
GATATCGCCG GTCTGGCGGA ATCCATGCTC AAGTACTGCT TCAATGCCGT ACTGCAAGAG
CGCATGGACG ATATGAAGTT CTTCGCCGAG CGTGTAGATG GCAGTGTTAT CGATCGTCTG
CAAAGTTTTG TGAGCAGCGA CTTTGCCCAG GTTGATTACA CCGACGCCGT TGAAATCCTG
CAAAACTGCG GTAAGACCTT CGAATATCCC GTTGAGTGGG GTATCGATCT GCAGTCTGAG
CACGAGCGTT ATCTGGCCGA AGAGCACTTC AAAGCCCCTG TGGTAGTGAA GAACTATCCA
AAAGACATCA AAGCCTTCTA CATGCGCCTC AACGAAGATG GCAAGACAGT CGCGGCCATG
GATGTACTGG CACCCGGCAT CGGTGAAATC ATCGGTGGCT CCCAGCGTGA AGAGCGACTG
GACGTACTGG ATGCCCGCCT CGAAGAGATG AACCTGTCGA AAGAAGACTA CTGGTGGTAC
CGTGATCTGC GCCGTTATGG CACAGTGCCA CATGCCGGTT TCGGTCTGGG CTTCGAGCGT
CTGGTCTCTT ACGTGACCGG TGTGGGTAAC ATCCGTGATG TGATCCCATT CCCACGTGCA
CCACGCAGCG CTAACTTCTA A
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| Protein sequence | MSIASIASVF KGDFAPGTEI TVRGWVRTRR DSKAGISFLA VYDGSCFDAI QGVVPNALSN
YNDEVLKLTA GCSVEMTGNL VESPGSGQAF ELQATAVKVT GWVDDPDTYP MAAKRHSIEH
LRDVAHLRPR TNIIGAVARV RNCLSQAIHR FYHENGFIWV STPIITASDC EGAGEMFRVS
TLDMENLPRT DAGKVDYDQD FFGKEAFLTV SGQLNGETYA CALSKIYTFG PTFRAENSNT
SRHLAEFWMV EPEVAFADLN DIAGLAESML KYCFNAVLQE RMDDMKFFAE RVDGSVIDRL
QSFVSSDFAQ VDYTDAVEIL QNCGKTFEYP VEWGIDLQSE HERYLAEEHF KAPVVVKNYP
KDIKAFYMRL NEDGKTVAAM DVLAPGIGEI IGGSQREERL DVLDARLEEM NLSKEDYWWY
RDLRRYGTVP HAGFGLGFER LVSYVTGVGN IRDVIPFPRA PRSANF
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