| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1683 |
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| Symbol | |
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| ID | 4603934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2057082 |
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| End bp | 2057996 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639781046 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_927559 |
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| Protein GI | 119774819 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000335311 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.588824 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGGCA GCAAAGCGAT TACTAGGCGG ATACACTTCA GCGCCATGGC GAGTGACTGT
GAACTGCTGT TTATCGGCGC CAGTGACGCA CAGGCCAACA CCTTTGCCGA ACTTGCCATC
GCCGAAGTGC GGCGCATCGA AGCCAAGTTC AGCCGCTATA GACCCGAGAG CGAGCTTAGT
CGCATCAACG GTCTCGCTGG CAGCCACATC CCCATTGATC CCGAGACTGA TGGGCTGCTT
AAATTCGCTG CCGACTGCTT CAGGCTTTCA GGCGGGCTTT TTGATGTCAC CACAGCACCA
CTGCAACAGC TGTGGCGGTT TGGCTTTAAA CATCATGGCC TTAACAATGA GTGTTTCCCG
CAAGAGGCGC AGATAAAGGC GGCACTCGAC CACATTGGCT TTGAACGGTT GGGGATCGAA
AACAATTCCC TCTGGCTTCC CGCTGGCATG AGCCTCGATT TTGGGGGGAT TGCCAAAGAG
TATGCTGCCG ACAGAGCGCT GCTTTTGATA GAACGCCAGG CCCGGGACCG CGGACTTGAT
GTTGCTGTGC TGGTAAACCT TGGCGGTGAT ATAGCCGCAA GCCGATACCC CTGGCAGATT
GGGGTTGAAG GGGTCCATGC CAAATGTGAC TCTGATCTGC TCAAGGCAGA AGCTTCGGGT
CTTATCGCGT TCCCCGGTGG CGGCCTTGCA ACCAGCGGTG ATACCAAGCG CTTTGTGCTG
GTGGACGGTA AGCGTGTTGG CCATATCCTG TCACCCAAAA CCGGTTATCC GGTGCCGGAT
TCGCCGCGTT CTGTCACGGT ACTGGCGCCC AGTGCGTCGG CCGCGGGAAT GTTGTCTACC
ATGGCCATGC TAAAGGGCGA GGGTGCTGAG GATTTTTTAA GGGGCGAAGG CCTTGTTTAT
CTGGTGCAGC GCTGA
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| Protein sequence | MAGSKAITRR IHFSAMASDC ELLFIGASDA QANTFAELAI AEVRRIEAKF SRYRPESELS
RINGLAGSHI PIDPETDGLL KFAADCFRLS GGLFDVTTAP LQQLWRFGFK HHGLNNECFP
QEAQIKAALD HIGFERLGIE NNSLWLPAGM SLDFGGIAKE YAADRALLLI ERQARDRGLD
VAVLVNLGGD IAASRYPWQI GVEGVHAKCD SDLLKAEASG LIAFPGGGLA TSGDTKRFVL
VDGKRVGHIL SPKTGYPVPD SPRSVTVLAP SASAAGMLST MAMLKGEGAE DFLRGEGLVY
LVQR
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