| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1682 |
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| Symbol | |
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| ID | 4603933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2055635 |
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| End bp | 2057056 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781045 |
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| Product | hypothetical protein |
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| Protein accession | YP_927558 |
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| Protein GI | 119774818 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0147454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.631868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAG TGTCGACATC GCCAGATGAC GGGTGTGTGG CTGAGCCAGC AGGGCAAACG
CGTCTTTGCC AATCCGGTAT TGCGGCGGCG GTCTGCCTCT CAAGCCTTGC CATGATAGGC
TTTGATGCGG CTGCCACCGA AACGCCAGCG ATTAACTCGG CTGAAGCGGT AAAGCAGGCG
TCTCATAGCG AAGATGACAG TCTGCTCACC CGGTTAATCG ACGGCTGGGA AATCGATGCG
GCGCTGTTGT GGTACCGCGA AGATGCCCGG GTGCAGGCCA TAGAGGGGGT GGTGTCCGGC
GTGAAGGCAC TCTCCGACAG CGAATCGATT AACGCCAAAA TTGTGCTCGA CAGTTTATCA
GGTGCTTCTG CGTCAGGCGC AGTCGCGCAG CAGTGGGCTC AAACCTTTAC AAGGCCTTCC
GGCAAGGGCG AATATCAGGT AGCAGCAGGC GAAACCCCGC TGGATGACAC CTTTCAGGAT
ACCCGGCTAT CTCTCTCCGG TGGCTGGCAG AAGACGCTGG ATAGCGCCAC TAAGGTTAAT
GCCGCCGTCT ATGGCTCCAA AGAGTTCGAC TATTTATCAC TTGGTATAAA TGGCGGCATA
GATTGGGGCT TTTTTAAGGA CAACACTACC TTAAGCCTCT CCGGCGCGCT TGGTTACGAC
TTGTTTGATG CCGTCGGCGG CAGGCCTGTG CCCTTAAGTA CGATGGCCAT CCGTAAAGAC
TTTGCCAATG ACGAGGCTTT CTGGCAGGCA TTTGATTTAA GCCGTCAGCA GGGCGTGGGC
GATAAGCGTA TTGCTGAAAT GATGCTTGGT GTGACCCAAA TACTGACCAA ATCCACCTTG
GTGCAATTTA ACTATGGCCT TGGTTATTCC AGTGGCTATT TGAATGACCC CTATAAGCTG
GTGTCTGTGT TGGATACCGA CGGCAACGCC AGCCATTACC TCTATGAATC CCGGCCTGAC
AGCCGATTAA AGCAAAGCGC ATTTGTGCTC GGTAAAACAG CATTCAAGCG CGGCGTGGCA
GAGTACTCTT ACCGCTATAC CCACGATGAT TGGGGCCTGG ACTCCCACAC CGTAGAAGGT
CGCTATCGCC ACTATTTCAG CACCAAAACG GGGCCTTATC TGCAGTTTCA TTTGCGGGGC
TATCGCCAGC AGGGCGTGGA TTTCTTTACG CCTTATCTTT TGCAGGGCGA GGTTGTCTCA
CCGCATATCA GCGCCGATTA CCGCATCGGT GACATGGACA CCTGGACGAT AGGGCTAAAA
ACCGGCTGGC GCCTTAAAGA TGGCGATGAG ATTGCGCTTC GCCTCGAGTA TTATCGCCAG
CTCCCAAGTG GTGAGGTATC CAGCCTTGAA GGACTGCAGG GGCTTGATGT GTACCCTGAG
CTTAATGCCG CCATGTTGCA GCTTAACTAC TCGTGGCGTT AA
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| Protein sequence | MQLVSTSPDD GCVAEPAGQT RLCQSGIAAA VCLSSLAMIG FDAAATETPA INSAEAVKQA
SHSEDDSLLT RLIDGWEIDA ALLWYREDAR VQAIEGVVSG VKALSDSESI NAKIVLDSLS
GASASGAVAQ QWAQTFTRPS GKGEYQVAAG ETPLDDTFQD TRLSLSGGWQ KTLDSATKVN
AAVYGSKEFD YLSLGINGGI DWGFFKDNTT LSLSGALGYD LFDAVGGRPV PLSTMAIRKD
FANDEAFWQA FDLSRQQGVG DKRIAEMMLG VTQILTKSTL VQFNYGLGYS SGYLNDPYKL
VSVLDTDGNA SHYLYESRPD SRLKQSAFVL GKTAFKRGVA EYSYRYTHDD WGLDSHTVEG
RYRHYFSTKT GPYLQFHLRG YRQQGVDFFT PYLLQGEVVS PHISADYRIG DMDTWTIGLK
TGWRLKDGDE IALRLEYYRQ LPSGEVSSLE GLQGLDVYPE LNAAMLQLNY SWR
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