| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1678 |
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| Symbol | |
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| ID | 4603929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2051729 |
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| End bp | 2053432 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781041 |
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| Product | hydrogenase large chain |
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| Protein accession | YP_927554 |
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| Protein GI | 119774814 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAC GTGTTGTTAT CGATCCCATC ACCCGTATCG AGGGCCATTT GCGCGTCGAG
GTCGAGGTAG ATGAGAACAA TGTGATTCAG AACGCCTGGT CCTCTTCCAC CCTGTGGCGC
GGCATTGAGG TTATCCTTAA GGGCCGTACG CCCATGGACG TGGGCCTGAT TGTGCAGCGT
ATTTGCGGTG TGTGTACCTA TTCCCACTAT CGCTGTGGTA CAGAAGCGGT GGAAAACGCC
CTCGGGGTAA AAATTCCACT CAACGCCAAG TACCTGCGTT CACTGATGCA AACGTCGCTC
TATATGCACG ACCATATAGT GCACTTCTAT CACCTCCATG GTCTCGATTG GGTGGATGTG
GTGTCTGCAC TCAGTGCCGA CCCAGCCAAG GCCGCTCAGG TGGCGCTCAA GTACACCGAT
AAGCCTATCG CGGCCGGTGA AGGTGAGCTT CGCGCCGTGC AGGAGCGGGT GAAAGGCTTT
GTGGAAAAAG GCCAGCTTGG CCCCTTCGCC AATGCCTACT GGGGCAATGG CACCTATAAG
TTTACCCCCG AGCAAAACCT GATTGCCCTG TCCCACTACC TCAAAGCGCT GGAAGTGCAG
CGCGTGGCGG CTGAAATGCT CGCCATCTTT GGTGGTAAGC AGCCTCACCC ACAATCTCTG
GTGGTGGGCG GCGTGACCTC AGTACGTGAC ATGTTAAGCC CTGCCCGTCT GCAGGAATGG
AAGCAAAAAC ATGCCTATGT GACCGACTTT ATCAAACGTG CTTATCAGGC CGATATTGTC
ATGGCTGCTG AAGCCTTCGG TACTGAGCCT TCAGTGCTTG GCGGCGTGAA CGTGAAAAAC
TTCCTGGCCA CAGATGACTT CGTCCTAGCC GATGGCGAGT ACATGTTTAA CGGCGGCGTG
ATAATGAACG GTGACCTGGC CGGTGTCAGC GACATCAACC CGGATTTGAT TGCCGAAGAC
GTCACCCACG CCTGGTACAG TGCCGACAAC GCCCAGCACC CCTATGATGG CACTACAGTG
CCTAACTATA CGGGCTTTGT GGAGCGTGAC ACCGTGTACG GCAAACTGCC TACCCTCGAT
GGTGACGGCA AGTACTCCTG GGTGAAGTCG CCACGCTATA ACGGCGAGCC TGTGGAAGTG
GGTCCACTCT CCAGCCTGCT GGTCAGTTAC GCCCGTGGCA ACAAGGTGGT CGTGGATGCC
GTTAACGGTC TTCTCGCCCG CACTGGCCTG CCTGTGGAAG CGTTGTTCAC CACTCTTGGC
CGCACTGCGG CGCGCATGCT GCAAACCGTG ATAGTGGCCG ATGAAGGTCT GCGTACCTTC
GATGCTCTGC TGACCAACAT TCAGTCAGAC GAAGCCACCT ATGTGAAGCC TGAAATCGAT
GCCAACAAAG AGTACGTTGG TCACGCCATG ATTGAAGCGC CTCGCGGTAT GCTGAGTCAC
TGGATCCGCA TCAAGGGCGG TAAAGTCGAA AACTATCAGG CTGTGGTGCC CACCACCTGG
AATGCGGGTC CCAAGGATGC CAACGGCAAG ATAGGCCCTT ATGAGGCATC GCTGATTGGC
TTAAAGCTTG AGGACCCCAC CAAACCGCTG GAGGTCATCC GCATCATCCA CTCCTTCGAC
CCCTGCATGG CTTGCTCGGT ACACGTAATG GACTTCAAGG GTGCAAGCCT GTCAGAGTTC
AAGGTGTCAC CAAACGGGCT CTAA
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| Protein sequence | MSQRVVIDPI TRIEGHLRVE VEVDENNVIQ NAWSSSTLWR GIEVILKGRT PMDVGLIVQR
ICGVCTYSHY RCGTEAVENA LGVKIPLNAK YLRSLMQTSL YMHDHIVHFY HLHGLDWVDV
VSALSADPAK AAQVALKYTD KPIAAGEGEL RAVQERVKGF VEKGQLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKQPHPQSL VVGGVTSVRD MLSPARLQEW
KQKHAYVTDF IKRAYQADIV MAAEAFGTEP SVLGGVNVKN FLATDDFVLA DGEYMFNGGV
IMNGDLAGVS DINPDLIAED VTHAWYSADN AQHPYDGTTV PNYTGFVERD TVYGKLPTLD
GDGKYSWVKS PRYNGEPVEV GPLSSLLVSY ARGNKVVVDA VNGLLARTGL PVEALFTTLG
RTAARMLQTV IVADEGLRTF DALLTNIQSD EATYVKPEID ANKEYVGHAM IEAPRGMLSH
WIRIKGGKVE NYQAVVPTTW NAGPKDANGK IGPYEASLIG LKLEDPTKPL EVIRIIHSFD
PCMACSVHVM DFKGASLSEF KVSPNGL
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