| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1677 |
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| Symbol | |
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| ID | 4603928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2051003 |
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| End bp | 2051719 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781040 |
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| Product | quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit |
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| Protein accession | YP_927553 |
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| Protein GI | 119774813 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
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| TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.623865 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCC AAGTTAATAC GCCGCCTGCG GGCGGCAAGC ATGACACGAA GCACGAGGTG
CATACCGGAG GGTACCAGCG GGAGTTTATC TTCACTGCCG CTATCCGACT CTTCCACTGG
CTAAGGGCGC TGGCGATTTT GATCCTGGTT ATCACAGGTT TCTACCTTGC CTGGCCATTT
TTGGTGGCAC CTGACTCCAG CGATGTACTG GTTCAGGGCT GGGTACGGTT TGGTCACCTG
GTGTTCGGCT TTGTGCTGTG CGCCGTGACC CTGGCCCGCG CTTATCTGTT CTTTTTCAGT
AAGCACGATA TTGAGCGGCG ATCCATCCGC GACGTGCTCA GCATCAACAG CTGGATTACC
CAACTTAAGT CCTACCTCTG GATGGGTAAG CTGAACAAGG CGGGGGTGTA TGGACCACTG
CAATTTGTGA CCTACTTTGC GATTTCGGTG ATTGCCGGCG CAATCTGTGT CACAGGGCTG
ATACTGTATG CCAATGTTTA TCATGAAGGC ATGGGTGGCA TGCTCTGGGG CATGGCGAGC
ACCCTGACCG CCTGGATGGG TGGCCTTGCC GAAGTGCGGC TGTGGCATCA TTACTTTACC
TGGGTATTTA TTGTATTCGT GGTCATCCAC GTTTACATGG CTGTGTGGAC TGGCATTCGC
TTTAAGCACA ACTCGGTAGA CTCCATCGTC TCCGGATATG ACTACCACAA GCATTAA
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| Protein sequence | MNTQVNTPPA GGKHDTKHEV HTGGYQREFI FTAAIRLFHW LRALAILILV ITGFYLAWPF
LVAPDSSDVL VQGWVRFGHL VFGFVLCAVT LARAYLFFFS KHDIERRSIR DVLSINSWIT
QLKSYLWMGK LNKAGVYGPL QFVTYFAISV IAGAICVTGL ILYANVYHEG MGGMLWGMAS
TLTAWMGGLA EVRLWHHYFT WVFIVFVVIH VYMAVWTGIR FKHNSVDSIV SGYDYHKH
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