| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1670 |
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| Symbol | |
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| ID | 4603921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2042878 |
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| End bp | 2043882 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781033 |
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| Product | hydrogenase expression/formation protein HypE |
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| Protein accession | YP_927546 |
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| Protein GI | 119774806 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0309] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR02124] hydrogenase expression/formation protein HypE |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACTA ACAGTATTCA GCTTGCCCAC GGTGGCGGCG GCCTGGAAAT GAATAAACTC
ATTCGTAACC TGTTTTTCAA GGCCTTTGAT AATTGCATCC TGAGAAATGA AGAAGATGCC
GCGCTGCTGA ACCTGCAGGG CCCCACCGCC TTTACCACAG ACTCTTTCAC CGTATCACCG
CTGTTTTTTG CCGGGGGCGA CATAGGCAAG CTGGCCATTG CCGGTACGGT CAATGATTTG
GCCATGATGG GCGCCGAGCC CCAGTATTTA AGCCTTGGGG TAATCATTGA AGAAGGCTTC
CCCATGGCAT CACTCGAAAC CATAGTGGCC TCCATGGCCA GCGAGCTGAA AAAGTGCGGT
GCTAAAATCG TCTGCGGCGA TACCAAGGTG GTTCCCAAAG GCTGTGCCGA TGGTCTCTTT
TTAAACACCA CAGGGGTGGG CCGTATTGTG AAACCGGGCT TGTCAGCCAA ACGCCTGATG
CCCGGTGATG CGATTCTGGT GTCCGGCGAC ATAGGACGCC ACGGGGCGGC CATCCTGATG
GCGCGGGAAG GACTGGAGCT GGAGTCCGGC CTTGTGAGCG ACTGTGCCAC CCTCTGGGGC
GCAGTTGAGC AGCTCTTGGT GCATCCGTTC GATATCCATG CCATGCGCGA CGCTACCCGG
GGCGGACTTT CCGCCGTACT GAATGAGTGG GCCGCTGCCT CTGATGTGAT GATTGAAGTC
GACGAGGCTG CCGTTCCTGT GAGCGATGAA GTAAAAGGCC TGTGTGAACT CTACGGCTTT
GAGGCCACAG ATCTCGCCAA TGAAGGCACC TTCGTCATGG CGCTGCCTGC CGCGCAGGCT
GACGGTGCAC TGGAGGTCCT CAAGCGCTTT GGCCATTGCG AGAATGCGGT CATCATAGGC
CGCGTCGGTG AAAGCCCGGC CGGGCGAGTG ATACTGCACA CCCCATGGGG CAGTAACAGG
TACCTCGACC TGCCCGCCGG TGAATTACTG CCAAGGATTT GCTGA
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| Protein sequence | MSTNSIQLAH GGGGLEMNKL IRNLFFKAFD NCILRNEEDA ALLNLQGPTA FTTDSFTVSP
LFFAGGDIGK LAIAGTVNDL AMMGAEPQYL SLGVIIEEGF PMASLETIVA SMASELKKCG
AKIVCGDTKV VPKGCADGLF LNTTGVGRIV KPGLSAKRLM PGDAILVSGD IGRHGAAILM
AREGLELESG LVSDCATLWG AVEQLLVHPF DIHAMRDATR GGLSAVLNEW AAASDVMIEV
DEAAVPVSDE VKGLCELYGF EATDLANEGT FVMALPAAQA DGALEVLKRF GHCENAVIIG
RVGESPAGRV ILHTPWGSNR YLDLPAGELL PRIC
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