Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1666 |
Symbol | |
ID | 4603917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2039062 |
End bp | 2039340 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639781029 |
Product | cell wall hydrolase/autolysin |
Protein accession | YP_927542 |
Protein GI | 119774802 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000405771 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAGAG CCTGTGCCAG ACATATTTTG GTTAAAACCC GAGAAGAAGC CGAAAAGCTT AAAGCCCGTA TCGACAAGGG AGAGGACTTT GGCAAACTGG CCAAGCAGTA TTCCCTTTGC CCATCCAAGC GTCGCAGTGG TGACCTGGGC GAGTTTGGCC CGGGGCAGAT GGTTAAAGCC TTTGACGATG TGGTATTCAA AAAGCCGATA CTGGAAGTCC ATGGCCCGGT AAAAACCCGC TTTGGTTTCC ACCTTATCCA AACCATCTAC CGCAACTGA
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Protein sequence | MARACARHIL VKTREEAEKL KARIDKGEDF GKLAKQYSLC PSKRRSGDLG EFGPGQMVKA FDDVVFKKPI LEVHGPVKTR FGFHLIQTIY RN
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