| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1664 |
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| Symbol | |
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| ID | 4603915 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2037123 |
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| End bp | 2038373 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781027 |
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| Product | tRNA and rRNA cytosine-C5-methylase |
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| Protein accession | YP_927540 |
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| Protein GI | 119774800 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0420674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGC AGTTTTTTCA ATGCCGGATA GCCACCATGC TCGCATCGCC TTTGTCACCG
TCTTCTGCCG AATTGGTTCT TGGGATCCTC AATCAGGTTC TTATGGAAGG CTCGCCCCTG
GACAGGGCCT ACTCACGTCA TTTTTCGGGT CTGAAACTCG AAAGTGAAGA GCAGGCCAGA
ATCGCGACGG TGACCGGTGA GCTTATCCGG CGTTTGAATC TTTTCTGTTT CCTTGCTGAC
ACCACCCCGG AGCGCATCGA GCGCGAAGGG AGCCGGGTAC TGAATGCCTG GCACAGATTC
CATGGTTTGC CCATTCCGCG TCTCAGATAC ACCCTGGATA TTGAAGAGGC GGTCTTTGCT
GAGCGCCTCG AGCGGGCCAA GGCAGAGCCA CTGTTGTGGG ACGGTTGCCC CGACTGGCTG
GATAAACTCG GACAGGCAGA GCTGGGTGAT ACCTGGGCGG CAGAGCGAGC AGCTCTTTCT
TTGGCCCCCA AGCGCTACTT GCGCACCAAT GGCCTTAAGT GTACGCGCGA TGAACTGGCA
ACGCGCCTGG CCGCCGAAGG GGTGCAGACG GTCCCCGTTG ACGGTGTAGA GTCTGCACTG
GAGGTGACGT CCAACGCCGC GCTCTTTCGT ACCAAGGCCT TTGCCGATGG CTGGTTTGAG
CAGCAGGATG CAGGATCACA GCTGGTTGCC GCAGCGCTGG ATGTGAAACC CGGGATGCGG
GTGATTGATG CCTGTGCCGG CGCCGGTGGT AAAACACTGC ATCTGGCCGC TGCCATGACA
GGTAAGGGCA GGCTGCTTGC CATGGACGTT GAGCAGTGGA AGCTGGATAA CCTCAAAGAG
CGGGCCCGCC GCGCAGGCGC GCACAATGTC GAGACCCGTC TGATTGCAGG CAGCAAAACC
ATCAAACGTT TGAAGCTGTC TGCTGACAGA CTGCTGCTGG ACGTGCCCTG CTCCGGTCTT
GGGGTGCTCA AGCGTAATCC CGATGCCAAG TGGCGTGATA CCGAAGAGCG TTTGCCGGTG
CTGATGGAGC TGCAGGCCCA TATTCTTGGC AGTTACAGCC GCATGGTGAA GGTGGGAGGC
ATTTTGGTGT ATGCAACCTG CTCGATAATG CCCTGTGAAA ACCGCGGTCA GGTTGATGCA
TTTTTGGCGG CCAACCCCAA CTTCCGCTTG CTGGAAGATG AGAATATTAC CCCGGCCACG
TCAGGATTCG ATGGTTTCTA TCTGGCCAAA TTGGAACGCA TCGCCGAATA A
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| Protein sequence | MIPQFFQCRI ATMLASPLSP SSAELVLGIL NQVLMEGSPL DRAYSRHFSG LKLESEEQAR
IATVTGELIR RLNLFCFLAD TTPERIEREG SRVLNAWHRF HGLPIPRLRY TLDIEEAVFA
ERLERAKAEP LLWDGCPDWL DKLGQAELGD TWAAERAALS LAPKRYLRTN GLKCTRDELA
TRLAAEGVQT VPVDGVESAL EVTSNAALFR TKAFADGWFE QQDAGSQLVA AALDVKPGMR
VIDACAGAGG KTLHLAAAMT GKGRLLAMDV EQWKLDNLKE RARRAGAHNV ETRLIAGSKT
IKRLKLSADR LLLDVPCSGL GVLKRNPDAK WRDTEERLPV LMELQAHILG SYSRMVKVGG
ILVYATCSIM PCENRGQVDA FLAANPNFRL LEDENITPAT SGFDGFYLAK LERIAE
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