| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1655 |
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| Symbol | |
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| ID | 4603906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2019731 |
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| End bp | 2020831 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639781018 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_927531 |
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| Protein GI | 119774791 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.677065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGC CGCTCTGTGT CGGGGCGGTG GCCAGTGGCC CGAGCAAATA TAACAAGAGT
CCTGTTATGG CGAGTAAAGC GACCTCTATC GATATTGCCT ATCGGGCGGG TGTGTCCCAG
TCCACTGTGT CCCGCGCCCT GAGGGACAGC CCCTTGGTGA GTCCGGAAAC CAAGGAAAAA
ATCCGTGCCA TTGCCCGCGA GCTTAACTAC AAGGTAGATA AAAACGCCAG TAATCTGCGT
ACCCAAAACA GCCATACCCT GGCATTGCTG CTGTGTGAAG ATCCCACCAA CGACGACTCC
CTGATTAATC CTTTCTTTTT GTCGATGCTG GGCTCTATTA CCCGGGCTAC TGCAAAACAG
GGCTACGATT TGTTGGTGTC TTTTCAGCAG CTTTCCAGCG ATTGGCACGC CGACTATGAA
GACAGCAACA AAGCAGACGG TATTATTCTG CTTGGCTACG GTGACTTTGT GGACTATGAG
CACAAGCTGG AGCGCTTGCT GGCCCAAAAT ACTCACTTTG TGATTTGGGG TGCTGAGCAC
AACAAGTCGA CGGTGGCTTC TGTGGGCTGT GATAATCAGC AGGGCGGCTT AATAGCCACC
GAACACCTAC TTTCCCTTGG TCGCAAATCC GTGGCATTTT TGGGGGATGC CTCAAGCCAC
AGCCCTGAGT TTCGCGACCG CTACCTTGGC CATGTCAGGG CGCTTAAAGA TGCGGGCCTT
GTGGCCGATA AGCGCTGCCA GGTGGATGCC ATCAGCACTG AAAGTGCCGG CTTTGATGCG
GCCAACAAGC TTATTCGCAA GGGTGCCCAG TTTGATGCCA TCTTTGCCGC CAGTGATTTG
ATTGCCATCG GGGCCATCAG GGCCCTGAAA GAAGCCGGGC TCAGGGTGCC CGAAGACGTG
GCTGTGGTGG GCTACGATGA TATTCCGGTG GCGAGCTTTG CCAATCCGCC ACTGACTACC
ATCAAGCAAA ACACCCAACT TGCCGGTGAA ATGTTGGTGG AAAGCCTGCT CAAACTCATT
CACGGCGAGG CTGTGCCACC ACGGTTAATC CCGACCAGCC TGGTGGTGAG GAAATCCTGT
GGCATTGACC TTGGCGATTA A
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| Protein sequence | MSLPLCVGAV ASGPSKYNKS PVMASKATSI DIAYRAGVSQ STVSRALRDS PLVSPETKEK
IRAIARELNY KVDKNASNLR TQNSHTLALL LCEDPTNDDS LINPFFLSML GSITRATAKQ
GYDLLVSFQQ LSSDWHADYE DSNKADGIIL LGYGDFVDYE HKLERLLAQN THFVIWGAEH
NKSTVASVGC DNQQGGLIAT EHLLSLGRKS VAFLGDASSH SPEFRDRYLG HVRALKDAGL
VADKRCQVDA ISTESAGFDA ANKLIRKGAQ FDAIFAASDL IAIGAIRALK EAGLRVPEDV
AVVGYDDIPV ASFANPPLTT IKQNTQLAGE MLVESLLKLI HGEAVPPRLI PTSLVVRKSC
GIDLGD
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